Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1566 |
Symbol | aroC |
ID | 1220397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1681674 |
End bp | 1682774 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637237951 |
Product | chorismate synthase |
Protein accession | NP_519687 |
Protein GI | 17546285 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0082] Chorismate synthase |
TIGRFAM ID | [TIGR00033] chorismate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGGCA ATACCCTGGG CCTGCTGTTT TCCGTCACCA CCTTCGGCGA GTCGCACGGC CCGGCCATCG GTGCCGTCAT CGACGGCTGC CCGCCGGGCA TGGCGCTGTC GGCCGAGGAC ATCCAGCCCG ATCTCGACCG CCGCAAGCCC GGCACCTCGC GCCACGTCAC GCAGCGCAAG GAAGAAGACC TTGTCGAGAT CCTGTCCGGC GTGTTCGAGG GCAAGACCAC CGGCACGCCC ATCTGCCTGC TGATCCGCAA CACCGACCAG CGCAGCAAGG ACTACGGCAA CATCGTCGAG ACCTTCCGCC CGGGCCATGC CGACTACACC TACTGGCACA AGTACGGCAT CCGCGACCCG CGCGGCGGCG GCCGTTCGTC GGCCCGGCTG ACGGCGCCCG TGGTGGCGGC CGGCGCCGTC GCCAAGAAAT GGCTGCGCGA GAAGTTCGGC GTCGAGATCC ACGGCTACAT GTCGCAGCTG GGCGAGATCC GGATTCCGTT CCTCGACTGG AACGAGGTGC CGAACAACCC GTTCTTCGCG CCCAACGCCG AGATCCTCCC CGAGCTCGAA ACCTACATGG ACGCGCTGCG CCGCGACGGC GACTCCGTCG GCGCGCGCAT CGAGGTGGTG GCGACCGGCA TGCCGGTCGG CTGGGGCGAG CCGCTGTTCG ACCGCCTGGA CGCCGACATC GCCCATGCCA TGATGGGCCT GAATGCAGTG AAGGGCGTGG AGATCGGCGC GGGCTTTCAT GCCGTGTCGC AGCGCGGCTC CGAGCACGGC GACGAACTGA CGCCGGCCGG CTTCGTCGGC AACAACGCGG GCGGTATCCT GGGCGGCATT TCCACCGGGC AGGACATCTC GGTATCGCTG GCGATCAAGC CGACCTCCAG CATCCGCACG CCGCGCCGCT CGATCGACAA GGCGGGCGAG CCGACCGCGG TCGAGACGTT CGGCCGCCAC GATCCGTGTG TCGGTATCCG CGCCACGCCG ATCGCCGAGG CGCTGCTGGC GCTGGTGCTG ACCGACCATG CGCTGCGCCA TCGTGCCCAA TGCGGCGACG TGGCGGTGGC GACCCCGGCC ATCGCCGCCA AGGCGCCGTA A
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Protein sequence | MSGNTLGLLF SVTTFGESHG PAIGAVIDGC PPGMALSAED IQPDLDRRKP GTSRHVTQRK EEDLVEILSG VFEGKTTGTP ICLLIRNTDQ RSKDYGNIVE TFRPGHADYT YWHKYGIRDP RGGGRSSARL TAPVVAAGAV AKKWLREKFG VEIHGYMSQL GEIRIPFLDW NEVPNNPFFA PNAEILPELE TYMDALRRDG DSVGARIEVV ATGMPVGWGE PLFDRLDADI AHAMMGLNAV KGVEIGAGFH AVSQRGSEHG DELTPAGFVG NNAGGILGGI STGQDISVSL AIKPTSSIRT PRRSIDKAGE PTAVETFGRH DPCVGIRATP IAEALLALVL TDHALRHRAQ CGDVAVATPA IAAKAP
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