Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1556 |
Symbol | |
ID | 1220387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1672034 |
End bp | 1673446 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637237941 |
Product | oxidoreductase protein |
Protein accession | NP_519677 |
Protein GI | 17546275 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.94486 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCACG ATGCCTTCCT GCAGGCCTGC ACCGACGCCA TCGGCGGCGC GCACGTCCTG ACCGCGCCGG AAGACCAGGC ACCCTATCTG ACCGACTGGC GCAAGCGCTT CACCGGCCGG GCACGCGCCG TGCTGCGCCC GGCCGATCCC GAGCAGGTCG CCGCGCTGGT GCGCCTGTGC GCCGGCCATG GCGTGCCGAT CGTCCCGCAG GGCGGCAACA CCGGGCTGTG CGGCGGCGCC ACGCCCGACG CCGCGGGCAC GGCCGTGGTG ATCTCGCTGC AGCGCCTGCA GCGCGTGCGC GCGGTCGATC CGATCAACAA CACCATCACC GTGGATGCCG GCTGCATCCT GGCGAGCGTG CAGGATGCGG CGGCAGCGGC CGACCGCCTG TTTCCGCTGA GCCTGGCCGC GGAAGGCAGC TGCACCATCG GCGGCAACCT GGCGACCAAT GCCGGCGGCA CGGCCGTGCT GCGCTACGGC AACGCGCGCG AACTGTGCCT GGGCGTGGAG GCCGTGCTGC CCGACGGCGC GCTGTGGAAC GGCCTGCGCG GCCTGCGCAA GGACAACACC GGCTACGATC TGCGCGACCT GCTGATCGGT GCGGAAGGCA CGCTGGGCAT CATCACCGGC GCGACGCTGA AACTGTTTCC GCAGCCACGC GCGCAGGTGA CGGCCCTGGC TGCATTGGCG TCACCGCGGC AAGCGCTGGC ATTCCTGTCG CTGGCGCAAA GCCATGCGGG CACGCTGCTG ACGGGGTTCG AGCTGATGTC GGCGTTCTGC CTGGCGCTGG TGCGCAAGCA CTACCCGCAG TTGCGCGTGC CATTCAGCCA GGCGTATCCG CAGTACGTCC TGCTCGAACT GTCGGACCTG GAAAGCGAAG CGCACGCGCG CGGCGTGTTC GAAACCCTGA TGGAAGACGC GCTGGCGCGC GAGGTGATCC TGGACGCCGC CGTCGCGGAA TCCGTCGCCC AGTCGCGCGC GCTGTGGGAT CTGCGCGAGC ACATCCCGCT CGCCCAGGCC GACGAAGGCA AGAACATCAA GCACGACATC GCCGTGCCGA TCTCGCGCAT CGCCGACTTC ATCGACTTGA CCGACCGCGC GCTGGCGGCC GCCTACCCCG GCATCCGCAT GGTGACCTTC GGCCACCTGG GCGACGGCAA CCTGCACTAC AACGTGTCGC CGCCGGCCGG CCAGGATCAC GAGACCTTCC TGGCCAACCA GCCCCGCATC AACCGCATCG TGCACGACAG CGTGCACGCG CACGGCGGCT CGATCTCGGC CGAGCACGGC ATCGGCCAGC TCAAGCGCGA GGACAACGCC CGCTACAAGA GCCCGGTTGA ATTGGCCGCC ATGCGCGCGA TCAAGCAGGC GCTCGATCCG CGCGGGCTGA TGAATCCGGG CAAGGTGCTA TAG
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Protein sequence | MTHDAFLQAC TDAIGGAHVL TAPEDQAPYL TDWRKRFTGR ARAVLRPADP EQVAALVRLC AGHGVPIVPQ GGNTGLCGGA TPDAAGTAVV ISLQRLQRVR AVDPINNTIT VDAGCILASV QDAAAAADRL FPLSLAAEGS CTIGGNLATN AGGTAVLRYG NARELCLGVE AVLPDGALWN GLRGLRKDNT GYDLRDLLIG AEGTLGIITG ATLKLFPQPR AQVTALAALA SPRQALAFLS LAQSHAGTLL TGFELMSAFC LALVRKHYPQ LRVPFSQAYP QYVLLELSDL ESEAHARGVF ETLMEDALAR EVILDAAVAE SVAQSRALWD LREHIPLAQA DEGKNIKHDI AVPISRIADF IDLTDRALAA AYPGIRMVTF GHLGDGNLHY NVSPPAGQDH ETFLANQPRI NRIVHDSVHA HGGSISAEHG IGQLKREDNA RYKSPVELAA MRAIKQALDP RGLMNPGKVL
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