| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1450 |
|---|
| Symbol | |
|---|
| ID | 1220279 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 1552057 |
|---|
| End bp | 1552533 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637237833 |
|---|
| Product | putative 6-pyruvoyl tetrahydrobiopterin synthase protein |
|---|
| Protein accession | NP_519571 |
|---|
| Protein GI | 17546169 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0720] 6-pyruvoyl-tetrahydropterin synthase |
|---|
| TIGRFAM ID | [TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGA CCGTTTCCAT CACGCGCCGG CTCGAATTCG ATGCCGGCCA CCGCATCCCG
GGGCACGCCG GCCAATGCCG CAACCTGCAC GGCCACCGCT ACCAGCTCGA GCTGACGCTG
TCCGGCGAAG TGCTGCACAA CGACAAGGCC ACCGATGACG GCATGATCCT CGACTTCGGC
GACGTGAAGA CGCTCGCCGC CAAGCACCTG GTCGAGCTGT GGGACCACGC TTTCCTGGTC
TATCGCGGCG ACACCAAGGT GGTCGAGTTC CTCGAAGGCA TGGAGGGCGG CCACAAGACC
GTGGTGCTGG ACGACGTGCC CACCGTCGAG AACCTCGCGC AGATCGCGTT CGACATCCTC
GAGCCGGTGT TCCGCAACGT CTACGGGCAC CACCTGCGGC TGTCCAAGCT GGTGCTGTAC
GAAACTCCCA ATTGCTGGGC GGATGTGAAG CTCGCGCGTC CGCACGAGCA GGATTGA
|
|---|
| Protein sequence | MTKTVSITRR LEFDAGHRIP GHAGQCRNLH GHRYQLELTL SGEVLHNDKA TDDGMILDFG
DVKTLAAKHL VELWDHAFLV YRGDTKVVEF LEGMEGGHKT VVLDDVPTVE NLAQIAFDIL
EPVFRNVYGH HLRLSKLVLY ETPNCWADVK LARPHEQD
|
|---|
| |