| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1446 |
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| Symbol | hipA |
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| ID | 1220275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1548504 |
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| End bp | 1549841 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637237829 |
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| Product | putative HIPA transcription regulator protein |
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| Protein accession | NP_519567 |
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| Protein GI | 17546165 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCATC CCGAACTGCA TCTGTGGATG AACGGCGAGC ATGTCGGCAT CTGGACCGCC
AGCCGCGCCG GCGTGCCGAT CCTGCGCTAT GACGACGCCT GGCTGCGCTC GCCCAACATG
CGGCCGCTGT CGCTGTCGCT GCCGATCCCG GCCGGTGTGC CCGAGCTGCG CGGCCAGGTG
GTCGACGACT ACTTCGACAA CCTGCTGCCC GAGGCCCAGC CCATCCGCGA GCGCGTGCGG
CGCCGCTTCG GCCTCGCCTC CACGGATGCC GCCGAATTGC TGGCCGCCAT CGGCCGCGAC
TGCGTGGGCG CCGTGCAACT GCTGCCGCCC GGCATGGCCC CCACCGGCTA CGACCGCATC
GACAGCGAGG CGCTCACCGA CAGCCAGGTC GACACGCTGC TGCGCAACCT CACCGCCATG
CCCGCGCTGG GCGAGGACGC CGGCGACCCC GACGCCTTCC GCATCTCCAT TGCCGGCGCG
CAGGAGAAAA CCGCCCTGCT GCGCATCGGC GATGCCTGGC ACCGGCCGCT GGGCGCCACG
CCCACCACGC ACATCCTCAA GCTGCCGCTG GGGCTGATCG GCAACATCCG CGCCGACATG
CAGGACTCGG TCGACAACGA ATGGCTGTGC GCGCAGCTGC TGGCGGCCTG GGGGCTGGAG
GTGGCGCGCA CCGAGATCGC CCGCTTCGGC GCCAGCAAAG TGCTGGCGGT CGAGCGCTTC
GACCGCCGCT GGATGCCGGG CAACGCCTGG ATCGCGCGCC TGCCGCAGGA AGACTTCTGC
CAGGCTACAG GCACGCCCGC GCACCGCAAA TACGAAAACG ACGGCGGCCC CGGCATGCGC
GCCTGCCTCG ACCTGCTGTC CGCGTCCGAA CACGCCATCG ACGACAAGCG CCGCTTCGTG
CTGGCGCAAC TTGCCTTCTG GCTGCTGGCC GCCACCGACG GGCACGCGAA GAACTTCTCG
CTGGCGATCG GGCGCGGCGG GCGCTTCCGC ATGACGCCGC TGTATGACGT GCTCTCGGTC
TGGCCGATCA TGGGCGACGG GCCGAACCAG CTGTCGCCCT ATCGCGCGCG GCTGGCGATG
GCCCTGCGCG GCAAGAACGC GCATGCGCGG CTGGCCGACA TCCACGTGCG CCACTGGCAG
GCGCTGGCGG CGCAATCCGG CGTGCCGGAC GCGTTCGCCG GCATGCAGGC GCTGGTCGAG
CGCGTGCCGG CGGGTCTCGA GCGGGTCGAG GCGATCCTGC CGCCCGACTT CTCGGGCCGG
GTCTGGAGCA GCGTGCGCAC CGGCGTGCTC GCGCAGGCCG AGCGCTTTCT CAACGAACTG
GCGTCCGTCA CCCCATGA
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| Protein sequence | MAHPELHLWM NGEHVGIWTA SRAGVPILRY DDAWLRSPNM RPLSLSLPIP AGVPELRGQV
VDDYFDNLLP EAQPIRERVR RRFGLASTDA AELLAAIGRD CVGAVQLLPP GMAPTGYDRI
DSEALTDSQV DTLLRNLTAM PALGEDAGDP DAFRISIAGA QEKTALLRIG DAWHRPLGAT
PTTHILKLPL GLIGNIRADM QDSVDNEWLC AQLLAAWGLE VARTEIARFG ASKVLAVERF
DRRWMPGNAW IARLPQEDFC QATGTPAHRK YENDGGPGMR ACLDLLSASE HAIDDKRRFV
LAQLAFWLLA ATDGHAKNFS LAIGRGGRFR MTPLYDVLSV WPIMGDGPNQ LSPYRARLAM
ALRGKNAHAR LADIHVRHWQ ALAAQSGVPD AFAGMQALVE RVPAGLERVE AILPPDFSGR
VWSSVRTGVL AQAERFLNEL ASVTP
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