Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1436 |
Symbol | tISRso11b |
ID | 1220265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1540188 |
End bp | 1541024 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637237819 |
Product | isrso11-transposase orfb protein |
Protein accession | NP_519557 |
Protein GI | 17546155 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTGCGC TGCGTGAGCG GCATTCATTG TCGAGCTTGC TCAAGGCCGC GAATCTCGCA CGCAGCACGT ACTACTACCA GATGGCGACA GGCCAGGCAG AGGATCGTCA CGGCGCGCTC AAGGAGCGCA TTCAGCACAT CTATGCCCAG CACAAGGGCC GATATGGCTA CCGCCGGATC ACGGCGACGC TCCGTCGGGC AGGGACGTTG GTGAATCACA AGACCGTACA GCGATTGATG TCGGCGCTAC AGTTGAAGTC ACTCGTGCGG CCGAAGAAAT ACCGCTCTTA CCTCGGGCAA GTCGGGCGGG TTGCTCCCAA TCTGCTACAG CGCGAGTTTG AGGCGAGCAA GCCGAACGAG AAGTGGGTAA CGGACGTGAC GGAGTTCAAC GTCGGCGGCA AAAAGCTGTA CCTGTCGCCC GTCCTGGACC TATACAACGG AGAGATCGTC GCCTGGCAAA CCAGTGAACG ACCTGATTAC ACGCTGATCC GGGAGATGCT CGACAAGGCG TTGCGCAAGC TGCGCCCGTG CGAGACGCCG ATGCTGCATT CGGATCAAGG CTGGCCGTAT CAAATGGCAG CGTATCGTCG CAAACTGGCC GCGCGAGGCC TGCGCCAGAG CATGTCCCGC AAAGGCAACT GCCTAGACAA TGCGGCAATG GAAAGCTTCT TCGGCACACT CAAGTCAGAG TGCTTCCGGT TAGAGCGCTT CGCGGACATC GACCAACTGC GACGCGCCAT TGCCGAATAC ATCCGGTACT ACAATCACGA GCGCATCAAG ATCAAGCTAA AAGGGCTGAG CCCTGTGCAA TACAGGACCC AGCCCTTGGC CGCCTAA
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Protein sequence | MSALRERHSL SSLLKAANLA RSTYYYQMAT GQAEDRHGAL KERIQHIYAQ HKGRYGYRRI TATLRRAGTL VNHKTVQRLM SALQLKSLVR PKKYRSYLGQ VGRVAPNLLQ REFEASKPNE KWVTDVTEFN VGGKKLYLSP VLDLYNGEIV AWQTSERPDY TLIREMLDKA LRKLRPCETP MLHSDQGWPY QMAAYRRKLA ARGLRQSMSR KGNCLDNAAM ESFFGTLKSE CFRLERFADI DQLRRAIAEY IRYYNHERIK IKLKGLSPVQ YRTQPLAA
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