Gene RSc1429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1429 
SymbolguaB 
ID1220253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1528044 
End bp1529507 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content67% 
IMG OID637237807 
Productinosine 5'-monophosphate dehydrogenase 
Protein accessionNP_519550 
Protein GI17546148 
COG category[F] Nucleotide transport and metabolism
[R] General function prediction only 
COG ID[COG0516] IMP dehydrogenase/GMP reductase
[COG0517] FOG: CBS domain 
TIGRFAM ID[TIGR01302] inosine-5'-monophosphate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0657932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0240553 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTTG TCCAGAAAGC ACTCACGTTC GATGATGTGC TGCTCGTCCC GGCCTACTCG 
GCCGTTCTTC CCCGCGATAC GTCGCTTCGC ACCAAACTCA CCCGCACGAT CGAGCTCGCC
ATTCCGCTGG TGTCCGCCGC CATGGACACC GTCACGGAAG CGCGCCTGGC CATCGCCATG
GCGCAGCAGG GCGGCATCGG CATCGTTCAC AAGAACCTGA AGCCGGAAGA GCAGGCGCGC
GAAGTCGCCA AGGTCAAGCG CTTCGAGTCG GGCGTGCTGC GCGACCCGAT CACCATCGGC
CCGGACATGA AGGTCCGTGA CGTGATGGCG CTGTCGGCGC AGCATGGCAT CTCGGGCTTC
CCGGTGCTGG AAGGCAACAA GGTGGTGGGC ATCATCACCA ACCGCGACCT GCGCTTCGAA
GAAGAGCTGG ACGCGCCGGT GCGCGCCAAG ATGACGCCGG GCGAGAAGCT CGTCACCGTC
AGGGAAGGCG CCTCGCTGGA AGAGGCCAAG CGCCTGATGA ACAAGCACCG CCTGGAGCGC
GTGCTGGTGG TCGACGGCAA TTTCGAGCTG CGCGGCCTCA TCACCGTCAA GGACATCCAG
AAGGCCACCG AGCATCCGCT GGCCTCCAAG GACGAGCGCG GCTCGCTGCG CGTCGGCGCG
GCGGTGGGCG TGGGCCCGGA CAATGACCTG CGCGTCGACC TGCTGGTCAA GGCCGGCGTG
GACGTGATCG TGGTCGATAC CGCGCACGGC CACAGCCAGG GCGTGCTGAG CCGCGTGCGC
TGGATCAAGG ACAAATACCC GCAGGTGCAG GTGATCGGCG GCAACATCGC CACGGCCGAA
GCCGCGAAGG CGCTGGTCGA CCACGGCGCG GACGGCGTCA AGGTCGGCAT CGGCCCGGGC
TCGATCTGCA CGACGCGGAT TGTAGCCGGC GTGGGCGTGC CGCAGATCAG CGCGGTGTCC
AACGTGGCCG AGGCGCTCAA GAACACCGGC GTGCCCCTGG TGGCCGACGG CGGCGTGCGC
TACTCGGGCG ACATCGCCAA GGCACTGGCG GCTGGCGCGC ACACCGTGAT GATGGGCGGC
ATGTTCGCCG GCACCGAAGA GGCGCCGGGC GAGGTGTTCC TGTACCAGGG ACGCTCGTAC
AAGAGCTACC GCGGTATGGG TTCGGTGGGC GCCATGAAGG ACGGCGCGGC CGACCGCTAC
TTCCAGGAAG ACAACACCGC CAACGTCGAT AAGCTGGTGC CGGAAGGCAT CGAGGGCCGC
GTCCCATACA AGGGCTCGGT GCTGCCGATC GTCCATCAGC TCACCGGCGG CATCCGCTCG
TCGATGGGCT ACTGCGGCTG CGCGTCGATC GCCGAATGGC ACGAGAAGAG CCAGTTCGTC
CAGATCACCG CCGCCGGCAT GCGCGAATCG CACGTGCACG ACGTGCAGAT CACGAAGGAA
GCGCCGAACT ATCACCTCGA CTGA
 
Protein sequence
MRLVQKALTF DDVLLVPAYS AVLPRDTSLR TKLTRTIELA IPLVSAAMDT VTEARLAIAM 
AQQGGIGIVH KNLKPEEQAR EVAKVKRFES GVLRDPITIG PDMKVRDVMA LSAQHGISGF
PVLEGNKVVG IITNRDLRFE EELDAPVRAK MTPGEKLVTV REGASLEEAK RLMNKHRLER
VLVVDGNFEL RGLITVKDIQ KATEHPLASK DERGSLRVGA AVGVGPDNDL RVDLLVKAGV
DVIVVDTAHG HSQGVLSRVR WIKDKYPQVQ VIGGNIATAE AAKALVDHGA DGVKVGIGPG
SICTTRIVAG VGVPQISAVS NVAEALKNTG VPLVADGGVR YSGDIAKALA AGAHTVMMGG
MFAGTEEAPG EVFLYQGRSY KSYRGMGSVG AMKDGAADRY FQEDNTANVD KLVPEGIEGR
VPYKGSVLPI VHQLTGGIRS SMGYCGCASI AEWHEKSQFV QITAAGMRES HVHDVQITKE
APNYHLD