| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1396 |
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| Symbol | |
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| ID | 1220220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1487584 |
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| End bp | 1488651 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637237774 |
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| Product | putative transmembrane protein |
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| Protein accession | NP_519517 |
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| Protein GI | 17546115 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTCGC GCTGGATGTT CGCCGCCGTC ACCGTCGTTT TCGCGGCCGC CCTGTCGGCG
CTGTCTTCCT CGTCGCCGGC CGCGCCGGCC GCAGCGGCCA CTGACGCGGC CACCTATGGC
CCGCGCCTGG AAGGCTTCGA CTATCCGGCG CCGGTCAAGC TGTATCCGTT CGCGTCGCAA
GGCAATGCGC TGGAGATGGC GTACCTCGAC ATCGAGCCCA GGCAGCCCAA CGGCGAGGTG
GCGGTGCTGC TGCACGGCAA GAACTTCTGC GCGGCCACCT GGGCCGGCAC GATCGCAGCG
CTCGCCGGCG CGGGCTACCG CGTGATCGCG CCCGACCAGA TCGGCTTCTG CAAATCGAGC
AAGCCGCGCG CCTACCAGTA TTCGTTCCAG CAGTTGGCCA GCAACACGCA CGCGCTGCTG
GTGTCGCTGG GCATCGGCCA GGCCATCGTG ATCGGCCACT CCACCGGCGG CATGCTGGCG
ACCCGCTATG CGCTGATGTA TCCGGCCGAA GTGTCGCGGC TGGTGATGAT CAACCCGATC
GGCCTGGAAG ACTGGAAAGC CAAGGGCGTG CCGCCGATGA CGGTCGATCA GTGGTACACG
CGCGAAAAGC AGACCACCGC CGAGCGCATC CGCGCCTATG AGCAGTCGAC CTATTACGCC
GGCCAGTGGC GTGCCGACTA CGAGCCCTGG GTGCAGATGC TGGCGGGCAT GTACCGCGGT
CCCGGCCGCG ATCTCGTCGC ATGGAGCTCC GCGCTGCTGT ACGACATGAT CTACACCCAG
CCGGTGGTCT ACGAATTCGG CCAACTGCGC CCGTGGACGC TGCTGCTGAT CGGCCAGAAA
GACACCACGG CCATCGCCAA GGACACCGCG CCGCCGGCAG TCCGCTCGCA ACTGGGCAAC
TACCCGGAAC TGGGCCGCGC CGCCGCGCGG GCGATTCCGC ACGCCACGCT GGTCGAGTTT
CCCGATGCGG GCCACGCGCC ACAGATCCAG GTGCCGGTTG CGTTGCACAA CGCCTTGCTG
GAATGGCTGG CCAGCCCGGA GCCCGCGCGC ACCCGGCGTC CCGATTGA
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| Protein sequence | MLSRWMFAAV TVVFAAALSA LSSSSPAAPA AAATDAATYG PRLEGFDYPA PVKLYPFASQ
GNALEMAYLD IEPRQPNGEV AVLLHGKNFC AATWAGTIAA LAGAGYRVIA PDQIGFCKSS
KPRAYQYSFQ QLASNTHALL VSLGIGQAIV IGHSTGGMLA TRYALMYPAE VSRLVMINPI
GLEDWKAKGV PPMTVDQWYT REKQTTAERI RAYEQSTYYA GQWRADYEPW VQMLAGMYRG
PGRDLVAWSS ALLYDMIYTQ PVVYEFGQLR PWTLLLIGQK DTTAIAKDTA PPAVRSQLGN
YPELGRAAAR AIPHATLVEF PDAGHAPQIQ VPVALHNALL EWLASPEPAR TRRPD
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