Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1340 |
Symbol | ssuC |
ID | 1220164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1427845 |
End bp | 1428639 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637237718 |
Product | aliphatic sulfonate ABC transporter transmembrane protein |
Protein accession | NP_519461 |
Protein GI | 17546059 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0574559 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATCGA AACCCAAGCA TGTTCTGAAG GCCGCGCGCG CGCGCCTGAC GCCGTGGCTC GTGCCGCTGG CGCTGCTGGC GGCGTGGCAG GCCGCGGCCC AATGGGGCTG GCTGTCGAAC CGCATCCTGC CGGCGCCGCT GGACGTCGCG CGCTCGGCCA TTGAGCTGGC GCGCTCGGGC GAGCTGTGGA AGCACGTGGC GGTCAGCACC TGGCGCGCGC TGCTGGGCTT TGCGATCGGC GGCTCGCTGG GGCTGGCGCT GGGGCTGCTG ACCGGCACCT TCCGCACGGC CGAGACGCTG CTCGACACCA CGCTGCAGAT GATCCGCAAC ATCCCGGTGC TGGCGCTGAT TCCGCTGGTG ATCCTGTGGT TCGGCATCGA TGAATCGGCC AAGCTGTTCC TGGTGTCGCT GGGCGTGTTC TTCCCGATCT ACCTGAACAC GTACCACGGC ATCCGCGCGG TGGACCCGGC GCTGGTGGAG ATGGCGCGCA GCTACGGCCT GTCGCGCGCG CGGCTGTACC GCGAGGTGAT TCTGCCGGGG GCGCTGCCGC AGATCCTGGT GGGGGTGCGC TTCTCGCTGG GGCTGATGTG GGTGACGCTG ATCGTCGCGG AGACCGTCTC CGCGCAGGCC GGCATCGGCT ACATGACGAT GAATGCGCGC GAGTTCCTGC AGACCGACGT GGTGCTGCTC GGCATCCTGC TTTATGCGCT GCTGGGCAAG CTGGCCGACC TGCTGTCGCG CGCGCTGGAA CGGTTCTGGC TGCGCTGGCA TCCGGGCTAT CAAGCGGCAA CCTGA
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Protein sequence | MASKPKHVLK AARARLTPWL VPLALLAAWQ AAAQWGWLSN RILPAPLDVA RSAIELARSG ELWKHVAVST WRALLGFAIG GSLGLALGLL TGTFRTAETL LDTTLQMIRN IPVLALIPLV ILWFGIDESA KLFLVSLGVF FPIYLNTYHG IRAVDPALVE MARSYGLSRA RLYREVILPG ALPQILVGVR FSLGLMWVTL IVAETVSAQA GIGYMTMNAR EFLQTDVVLL GILLYALLGK LADLLSRALE RFWLRWHPGY QAAT
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