| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1335 |
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| Symbol | clpB |
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| ID | 1220159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1420990 |
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| End bp | 1423578 |
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| Gene Length | 2589 bp |
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| Protein Length | 862 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637237713 |
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| Product | ATP-dependent protease |
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| Protein accession | NP_519456 |
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| Protein GI | 17546054 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.255547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTGG ACAAACTGAC CACCCGCTTC CAGGAAGCGT TGGCCGACGC GCAAAGCCTG
GCGTTGGGCA ACGACAATCC GTATATCGAA CCGCTCCATC TGCTGCTGGC GATGCTGCGC
CAGCCCGACG GGGCCACCAA GAACCTGCTG GCGCGCGCGG GCGTCAACGC CAAGGGGCTC
GAGATCGCGC TCGACAACGC GATCAAGCGC CTGCCGCAAG TGCAGGGCGG CGAACAGGTG
CAGGTCGGCC GGGACCTGGG CAGCCTGCTG CAGGCCACGG AGAAAGAGGG CATCAAGCGC
GGTGACCAGT TCATCGCGAG CGAGCTGTTC CTGCTGGCCG TGGCCGACGA CAAGGGCGAG
GCCGGCCGCG TCGCGCGCGA GCACGGGCTG GCGCGCCGTG CGCTGGAGGC GGCCATCGAT
GCCGTGCGCG GCGGCCAGAC CGTCGGCAGC GCCGAGGCCG AGAGCCAGCG CGAGGCGCTC
AAGAAGTACA CCATCGACCT GACCGAGCAG GCGCGCATCG GCAAGCTCGA CCCGGTCATT
GGCCGCGACG ACGAGATCCG CCGCGCGATC CAGATCCTGC AGCGCCGCAC CAAGAACAAC
CCGGTGCTGA TCGGCGAGCC GGGCGTGGGC AAGACCGCCA TCGTCGAGGG CCTGGCGCAG
CGCATCATCA ACGGCGAGGT GCCCGAGAGC CTGAAGAACA AGCGCGTGCT GGTGCTCGAC
ATGGCGGGCC TGCTGGCCGG CGCCAAGTAC CGCGGCGAGT TCGAGGAGCG GCTGAAGGCC
GTGCTCAACG ATATCGCCAA GGAAGAGGGC CAGACCATCC TCTTCATCGA CGAGATCCAC
ACCATGGTGG GCGCGGGCAA GGCCGAGGGC GCGATCGATG CCGGCAACAT GCTCAAGCCG
GCGCTGGCGC GCGGCGAGCT GCACTGCATC GGCGCGACCA CGCTGGATGA GTACCGCAAG
TACATCGAAA AGGATGCCGC GCTGGAGCGC CGCTTCCAGA AGGTGTTGGT CGACGAGCCG
AGCGTGGAGG CGACCATCGC CATCCTGCGC GGCCTGCAGG AGAAATACGA GCTGCACCAC
GGCGTGGAGA TCACCGACCC GGCGATCGTG GCGGCGGCCG AGCTGAGCCA TCGCTACATC
ACCGACCGCT TCCTGCCCGA CAAGGCCATC GACCTGATCG ACGAGGCGGC CGCGCGCATC
AAGATGGAAA TCGACTCGAA ACCCGAGGCG ATGGACAAGC TCGACCGCCG GCTGATCCAG
CTGAAGATCG AGCGCGAGGC GGTGAAGAAG GAAACCGACG AGGCGTCGCA GAAGCGGCTG
GAGCTGATCG AGCAGGAAAT CGAGCGGCTG CAGAAGGAGT ACGCCGACCT CGAAGAGATC
TGGAAGGCCG AGAAGGGCGC GGCGCAGGGC GCGGCGGCGG TGAAGGAAGA GATCGACCGG
GTCAAGCTGG AGATCGCCCG GCTGCAGCGC GAGGGCAAGC TCGACAAGGT GGCCGAGCTG
CAGTACGGCA GGCTGCCCGA GCTGGAAGGC AAGCTGAAGG CCGCCACCGC GGCGGAAGCC
AGCGGCCAGA GGCCGCCCAA CAAGCTGCTG CGCACGCAGG TGGGCGCCGA AGAGATTGCC
GAGGTGGTCA GCCGCGCCAC GGGCATCCCC GTGTCGAAGA TGATGCAGGG CGAGCGCGAC
AAGCTGCTGC GCATGGAAGA CCGCCTGCAC GAGCGCGTGG TCGGCCAGGA CGAGGCGGTG
CGGCTGGTGT CGGACGCCAT CCGGCGCTCG CGCGCGGGCA TCGCGGACGA GAACAAGCCT
TACGGCTCGT TCCTGTTCCT GGGCCCGACG GGCGTGGGCA AGACCGAACT GTGCAAGGCG
CTGGCCGGCT TCCTGTTCGA CTCGGAGGAG CACCTGATCC GCATCGACAT GAGTGAGTTC
ATGGAGAAGC ATTCGGTGAG CCGCCTGATC GGCGCGCCGC CGGGCTACGT CGGCTACGAG
GAGGGCGGCT ACCTGACCGA GGCCGTGCGC CGCAAGCCGT ACAGCGTGGT GCTGCTGGAC
GAGGTCGAGA AGGCGCATCC GGATGTGTTC AACATCCTGC TGCAGGTGCT GGACGACGGC
CGCCTGACCG ATGGCCAGGG CCGCACGGTG GACTTCAAGA ACACGGTGAT CGTGATGACG
TCCAACCTGG GCTCGCAGCT GATCCAGCAG ATGGCGTCCG AGTCGCCCGA TGTGATCAAA
GGTGCGGTGT GGCAGGAGGT GAAGACGCAT TTCCGGCCCG AGTTCCTGAA CCGCATCGAC
GAGGTGGTGG TGTTCCACGC GCTCGACCAG GGCCACATCG AGTCGATCGC GCGCATCCAG
CTGCAGCGGC TGGCGGCCCG CCTGGCGCAC ATGGACCTGA CGCTGGAGAT CAGCGACCCG
GCGGTCGCCA AGCTGGCCTC GGCGGGGTAC GACCCGGTGT TCGGCGCGCG GCCGCTCAAG
CGCGCGATCC AGCAGCAGAT CGAGAACCCG GTCGCGCGGA TGATCCTGGA AGGCCGGTTC
ACGCCGAAGG ACGTGGTGCC GGTGGATTAC CACGACGGCC ACTTCACCTT CGATCGTGTC
GTGCGCTGA
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| Protein sequence | MRLDKLTTRF QEALADAQSL ALGNDNPYIE PLHLLLAMLR QPDGATKNLL ARAGVNAKGL
EIALDNAIKR LPQVQGGEQV QVGRDLGSLL QATEKEGIKR GDQFIASELF LLAVADDKGE
AGRVAREHGL ARRALEAAID AVRGGQTVGS AEAESQREAL KKYTIDLTEQ ARIGKLDPVI
GRDDEIRRAI QILQRRTKNN PVLIGEPGVG KTAIVEGLAQ RIINGEVPES LKNKRVLVLD
MAGLLAGAKY RGEFEERLKA VLNDIAKEEG QTILFIDEIH TMVGAGKAEG AIDAGNMLKP
ALARGELHCI GATTLDEYRK YIEKDAALER RFQKVLVDEP SVEATIAILR GLQEKYELHH
GVEITDPAIV AAAELSHRYI TDRFLPDKAI DLIDEAAARI KMEIDSKPEA MDKLDRRLIQ
LKIEREAVKK ETDEASQKRL ELIEQEIERL QKEYADLEEI WKAEKGAAQG AAAVKEEIDR
VKLEIARLQR EGKLDKVAEL QYGRLPELEG KLKAATAAEA SGQRPPNKLL RTQVGAEEIA
EVVSRATGIP VSKMMQGERD KLLRMEDRLH ERVVGQDEAV RLVSDAIRRS RAGIADENKP
YGSFLFLGPT GVGKTELCKA LAGFLFDSEE HLIRIDMSEF MEKHSVSRLI GAPPGYVGYE
EGGYLTEAVR RKPYSVVLLD EVEKAHPDVF NILLQVLDDG RLTDGQGRTV DFKNTVIVMT
SNLGSQLIQQ MASESPDVIK GAVWQEVKTH FRPEFLNRID EVVVFHALDQ GHIESIARIQ
LQRLAARLAH MDLTLEISDP AVAKLASAGY DPVFGARPLK RAIQQQIENP VARMILEGRF
TPKDVVPVDY HDGHFTFDRV VR
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