Gene RSc1312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1312 
Symbol 
ID1220136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1397340 
End bp1397966 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content59% 
IMG OID637237690 
Producthypothetical protein 
Protein accessionNP_519433 
Protein GI17546031 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1392] Phosphate transport regulator (distant homolog of PhoU) 
TIGRFAM ID[TIGR00153] conserved hypothetical protein TIGR00153 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGGTC GCTTCATGCC CACCGAAGGC AAGTTTTTCG AATACTTCAA TCAGCACGCC 
GAGTGCGCCG TGACGGCGGC CCACGCATTG AAGGACCTCG TCAACGACTT GCCCAATGCC
GAGATGCATG CACGCAACGT GCAGAACATC GAGAAGAAGG CCGACCGCAT CACCCACGAC
ACGGTGGAGC TGCTGCACAA GACGTTCATC ACGCCGCTGG ATCGCGATGA GATCCACAAG
CTGATCACGA CCATGGACGA CATCATCGAT CTGATGGAGG ACGTGTCGCT GACCATCTCG
CTGTACGACG TGACCAACGT GACGGACGAG GCCCGCCAGC TGGCCGCGTT CAGCGTGTCG
TGCTGCGAGG AGGTGCGCAA GGCCGTAGCG CTGCTCGATG ACATGAACAA TGGCCGGCAG
ATCCTGACCA TCGCGCAGGA AATCGATCGC CTCGAATCCG AAGCCGACCG CGTCATGCGT
GCCGCCATGG CCAAGCTGTT CCGCACCGAG AGCGACATCA AGCTGCTGAT CAAGCTCAAG
GCGATCTACG AGCAACTGGA GAGCATCACC GATCGTTGCG AGGATGTCGC CAACATCATC
GAAGGCATCG TGCTCGAGAA CGCCTGA
 
Protein sequence
MFGRFMPTEG KFFEYFNQHA ECAVTAAHAL KDLVNDLPNA EMHARNVQNI EKKADRITHD 
TVELLHKTFI TPLDRDEIHK LITTMDDIID LMEDVSLTIS LYDVTNVTDE ARQLAAFSVS
CCEEVRKAVA LLDDMNNGRQ ILTIAQEIDR LESEADRVMR AAMAKLFRTE SDIKLLIKLK
AIYEQLESIT DRCEDVANII EGIVLENA