Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1312 |
Symbol | |
ID | 1220136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1397340 |
End bp | 1397966 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637237690 |
Product | hypothetical protein |
Protein accession | NP_519433 |
Protein GI | 17546031 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1392] Phosphate transport regulator (distant homolog of PhoU) |
TIGRFAM ID | [TIGR00153] conserved hypothetical protein TIGR00153 |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGGTC GCTTCATGCC CACCGAAGGC AAGTTTTTCG AATACTTCAA TCAGCACGCC GAGTGCGCCG TGACGGCGGC CCACGCATTG AAGGACCTCG TCAACGACTT GCCCAATGCC GAGATGCATG CACGCAACGT GCAGAACATC GAGAAGAAGG CCGACCGCAT CACCCACGAC ACGGTGGAGC TGCTGCACAA GACGTTCATC ACGCCGCTGG ATCGCGATGA GATCCACAAG CTGATCACGA CCATGGACGA CATCATCGAT CTGATGGAGG ACGTGTCGCT GACCATCTCG CTGTACGACG TGACCAACGT GACGGACGAG GCCCGCCAGC TGGCCGCGTT CAGCGTGTCG TGCTGCGAGG AGGTGCGCAA GGCCGTAGCG CTGCTCGATG ACATGAACAA TGGCCGGCAG ATCCTGACCA TCGCGCAGGA AATCGATCGC CTCGAATCCG AAGCCGACCG CGTCATGCGT GCCGCCATGG CCAAGCTGTT CCGCACCGAG AGCGACATCA AGCTGCTGAT CAAGCTCAAG GCGATCTACG AGCAACTGGA GAGCATCACC GATCGTTGCG AGGATGTCGC CAACATCATC GAAGGCATCG TGCTCGAGAA CGCCTGA
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Protein sequence | MFGRFMPTEG KFFEYFNQHA ECAVTAAHAL KDLVNDLPNA EMHARNVQNI EKKADRITHD TVELLHKTFI TPLDRDEIHK LITTMDDIID LMEDVSLTIS LYDVTNVTDE ARQLAAFSVS CCEEVRKAVA LLDDMNNGRQ ILTIAQEIDR LESEADRVMR AAMAKLFRTE SDIKLLIKLK AIYEQLESIT DRCEDVANII EGIVLENA
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