| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1299 |
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| Symbol | |
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| ID | 1220122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1385284 |
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| End bp | 1386318 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637237676 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | NP_519420 |
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| Protein GI | 17546018 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0487705 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.670063 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTGCTG AACGCTCTAC GCCGAATCCG CGTCGCCTGT CCGTTGCCCC GATGATGGAC
TGGACCGATC GCCACTGTCG CTACTTCCAT CGCCAGATCT CCCGCCACAC CTGGCTCTAC
ACGGAAATGG TGACCACCGG CGCGCTCCTG CACGGCGACG TGCCGCGCCA TCTCGACTTC
GACGAGGCGG AGCACCCGGT TGCGCTGCAG CTCGGCGGCA GCGAACCCGA CGACCTGGCG
CAGTCCGCCC GCTTGGGGGA GCGCTGGGGC TATCGCGAGA TCAACCTGAA CTGCGGCTGT
CCGTCCGAGC GCGTGCAGCG CGGTGCGTTC GGCGCGTGCC TGATGGCCGA GCCGAAGCTG
GTGGCCGATG GCGTCAAGGC GATGCGCGAT GCGGTGTCGA TCCCGGTCAC GGTCAAGCAC
CGTATCGGCA TCGACGCGAT TGAGACCTAC GACTTCGTGC GCGATTTCGT CGGCGCCATC
GCCGAGGCGG GTTGCGAGAC CTTCATCGTG CACGCCCGCA ACGCCATCCT GAAGGGGTTG
AGCCCGAAGG AGAACCGCGA GATCCCGCCT CTGCGCTACG AGGTGGTCTA CCAGCTCAAG
CGTGATTTCC CGCGGCTGGA GATCCTGCTG AACGGCGGCG TGCAGACGCT GGAGCAGATC
GACACGCATC TTGCCCACGT CGACGGCGTG ATGATCGGCC GCGAGGCCTA TCACCACCCG
CACCTGATGG CGGGCTTCGA TGCGCGCTAC TACGGTGCCG ACGCGGTCGC GCCCACGCGC
GCCGAGGTCG AAGACGCAAT GATCGATTAC ATCGGCCGCT GGGTGGCGCG GGGCGGATAT
GCCGGCGCAG CGGTGCGCCA CATGCTGGGG CTGTATCGCG GCGTGGCCGG CGCCCGGGGC
TGGCGGCGCG TGCTGTCGGA CGCCAAGGCG CTTGGCCGCG TCAAGACGCC GGACGACGCG
CGAGCCCTGT TCGAGACGGC GCGCGCGCAC CTGCGCCGCG GCGCGGAGGC GGATGAAGAG
GCGGTCGCCC CATAA
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| Protein sequence | MSAERSTPNP RRLSVAPMMD WTDRHCRYFH RQISRHTWLY TEMVTTGALL HGDVPRHLDF
DEAEHPVALQ LGGSEPDDLA QSARLGERWG YREINLNCGC PSERVQRGAF GACLMAEPKL
VADGVKAMRD AVSIPVTVKH RIGIDAIETY DFVRDFVGAI AEAGCETFIV HARNAILKGL
SPKENREIPP LRYEVVYQLK RDFPRLEILL NGGVQTLEQI DTHLAHVDGV MIGREAYHHP
HLMAGFDARY YGADAVAPTR AEVEDAMIDY IGRWVARGGY AGAAVRHMLG LYRGVAGARG
WRRVLSDAKA LGRVKTPDDA RALFETARAH LRRGAEADEE AVAP
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