Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1284 |
Symbol | |
ID | 1220107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1365633 |
End bp | 1366379 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637237661 |
Product | hypothetical protein |
Protein accession | NP_519405 |
Protein GI | 17546003 |
COG category | [S] Function unknown |
COG ID | [COG2836] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0623013 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCGG CAGCATTATT GAGTGTCTTT CTGATTGCGT TGCTCGGCGG CGTGCATTGC CTTGCCATGT GCAGCGGTAT TGCGCTTGCC GCGGAGCGCG CGCAGCCTGC CGTGCGCATC GTTTCGCGTC GCCGGCTGTG GTTCGAGCAA CTGGTGATGC ATCTGGGGCG GCTCACCACT TACGCGCTGC TCGGGGCCGC GATGGGCGCA CTCGGCGCGA CGGTGTGGCG GCAGCAGTGG CTGCCCATCC AGCGTGGCCT GTTTGCGTTG GCGAGCGCGC TGTTGCTCGC CTATGGGTTG CTTCTGCTGT CGCGCACGGC TGCCGATGTC TGGCGTGGCG CCTGGCTCGA ACGCATACTT GGGCGCCTGT CCGGCGGGCT GGCGGCCGTT GCCTCGGGGG TGCGCGCGTC GTCGCTGCGT GCGCGTTTTC CGTTGGCGGG CCGGTATCTG ACCGGGCTGG CCTGGGGGCT GGTGCCTTGT GGCATGGTCT ATGGCGCGCT GGCCGTCGCG TTGCTGGCGG GCAACGCGGC ATCGGGGGCG GTGGTCATGC TGGCGTTCGG CGCGGGCACG CTGCCGAACC TGCTGATGAT GTCGGGCGTG GCCGGATGGT TGCGTGGCGT GTCGCGGATG CGCTGGGCTC GCGGTGTCGC GGGCATCGGA ATCGCCGCAT TCGGCATCTG GGGACTCGTG TGTGCCGCGT GGCTGCCCGA GATGCTCAAC GCACATGGAT TCTGCCTGGT ACTTTGA
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Protein sequence | MSAAALLSVF LIALLGGVHC LAMCSGIALA AERAQPAVRI VSRRRLWFEQ LVMHLGRLTT YALLGAAMGA LGATVWRQQW LPIQRGLFAL ASALLLAYGL LLLSRTAADV WRGAWLERIL GRLSGGLAAV ASGVRASSLR ARFPLAGRYL TGLAWGLVPC GMVYGALAVA LLAGNAASGA VVMLAFGAGT LPNLLMMSGV AGWLRGVSRM RWARGVAGIG IAAFGIWGLV CAAWLPEMLN AHGFCLVL
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