Gene RSc1241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1241 
SymbolmocB 
ID1220064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1315847 
End bp1316776 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content65% 
IMG OID637237618 
Productputative rhizopine-binding precursor signal peptide protein 
Protein accessionNP_519362 
Protein GI17545960 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAACA CGCTGATGGC CGCCGCCGCG GCCGCCGCCA TTCTTGCCAC GCCGCTGGCG 
CACGCCGAGA AGATCGGCGT GGCGATGGCG CTCTTCGACG ACACGGGCCT GACCATTCTG
CGCAACGGCA TCGCCGACAC GGCGAAGAAG CATGGCGCGA CCGTCCAGAT CGAGGATGCC
GGCAACGACG TCGGCAAGCA ACTCAGTCAG GTCCAGAACA TGATTGCGCA GAAGGTCGAC
GCGATCATCG TCAACCCGGT CGACACCGAC GCGACGCCCA AGATCACGAG GATGGTGACC
GAGGCGAAGA TCCCCCTGGT CTACGTGAAT CGCAAGCCGG TGGATTTCGA CAAACTGCCG
GCCGGCGTGG CGGTGGTGGC GTCCGACGAG CGGCTCTCGG GCACGCTGCA GGCCCGGCAG
GTGTGCAAGC TGCTCGGCGG CAAGGGCGAT CTCCTGGTGC TGATGGGCGA GCTCTCCAAT
GAATCGGCGC GCGCCCGGAC CAAGGACATC GAGGACGTGA TCGCGACCAA CGCGTGTGCC
GGCATGAAGA TCGTCGACAA GCGCGAAGGC AGGTGGAGCC GTACGCTGGG CCAGGACATC
ACGATGAACT GGCTGAGCAC GGGCATGAAG TTCGACGCGA TCGTCTCGAA CAACGACGAA
ATGGCGATCG GTGCGATCAA TGCCTTGAAG TCGGCCAGGA AGTGGACGCC GAAGACCATC
GTGGCCGGCA TCGACGCCAC CCCCGACGGG CTCGCCTCGA TGCGCAGCGG AGACCTGAAG
GTTTCTGTCT TCCAGAACCT GCCCGGGCAG GGCGCAGCGG CGATCGATGC AGCGATCAAG
CTGGCGAAGA AGCAGCCGGT GGAGCGCTTC GTGAACGTGC CGTTCGAGCT CGTCACGCCA
GAGAACCTGA CCCAGTACGC CAAGCACTGA
 
Protein sequence
MKNTLMAAAA AAAILATPLA HAEKIGVAMA LFDDTGLTIL RNGIADTAKK HGATVQIEDA 
GNDVGKQLSQ VQNMIAQKVD AIIVNPVDTD ATPKITRMVT EAKIPLVYVN RKPVDFDKLP
AGVAVVASDE RLSGTLQARQ VCKLLGGKGD LLVLMGELSN ESARARTKDI EDVIATNACA
GMKIVDKREG RWSRTLGQDI TMNWLSTGMK FDAIVSNNDE MAIGAINALK SARKWTPKTI
VAGIDATPDG LASMRSGDLK VSVFQNLPGQ GAAAIDAAIK LAKKQPVERF VNVPFELVTP
ENLTQYAKH