Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1237 |
Symbol | iolB |
ID | 1220060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1309821 |
End bp | 1310636 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637237614 |
Product | putative myo-inositol catabolism protein |
Protein accession | NP_519358 |
Protein GI | 17545956 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3718] Uncharacterized enzyme involved in inositol metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATCT CTCCATTGCT GGTCAAGGCG TTGCCGAAGC GCGAGATATG CAATGTCACG CCGGAATCCG CCGGCTGGAA GCACGTCGGC TTTCGCGCGC TGCGCCTGGC GGCCGGCGAC CACGAAACGG TGGAAACCGG TACGCGCGAG CTGTGCGTGG TCGTGCTGAC CGGCACGATC CGCGCCGAGG TCGACGGCAC CACGTTTGAG GGCCTGGGCA AGCGCGACAG CGTGTTCGAC GACGTGTCGC CCGATGCCCT GTACGCGCCC GGCGGCAAGA CCGTCACGAT CACCGCCACG CGCGACGCGG AAGTCGCGCT CTGCACCGCG CCCTGCATCA GCGGCGACAA GGTCGTGCAC CGCCTCGACG GCGAGCGGAT GCGCCGCACC GTGCGCGGCA GTGGCAGCAA CACCCGCTAC GTCTGCGACA TCCTGATGGG CGACAACCCG GCGGCCGACC GGCTGCTCGT GGTGGAGGTG GTGACCCCGG CCGGCCATTC CAGCAGCTAT CCGCCGCACA AGCACGACAG CGCCGCCGAG CCCGGCGAAA CCGTGCTGGA GGAAACCTAC TACCACCGGC TCAACCCGCC CCAGGGCTTT GCGTTCCAGC GCGTCTACAC CGATGACCGC AGCCTGGACG AAGCCTGCGC CGTCGAGAAT CACGACGTCG TCATGGTGCC GCGCGGCTAC CACCCGGTGG TCGCGCCGCA CGGCTACAGC CTGTATTACC TGAACGTGAT GGCCGGTCCG AGCCGGGCGT GGGCCTTCCG GAACGACCCG GTCCATGAGT GGATGCTGCG TCCGCCTTCG GACTAA
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Protein sequence | MTISPLLVKA LPKREICNVT PESAGWKHVG FRALRLAAGD HETVETGTRE LCVVVLTGTI RAEVDGTTFE GLGKRDSVFD DVSPDALYAP GGKTVTITAT RDAEVALCTA PCISGDKVVH RLDGERMRRT VRGSGSNTRY VCDILMGDNP AADRLLVVEV VTPAGHSSSY PPHKHDSAAE PGETVLEETY YHRLNPPQGF AFQRVYTDDR SLDEACAVEN HDVVMVPRGY HPVVAPHGYS LYYLNVMAGP SRAWAFRNDP VHEWMLRPPS D
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