| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1232 |
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| Symbol | rpiA |
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| ID | 1220055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1303464 |
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| End bp | 1304150 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637237609 |
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| Product | ribose-5-phosphate isomerase A |
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| Protein accession | NP_519353 |
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| Protein GI | 17545951 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0120] Ribose 5-phosphate isomerase |
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| TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0408833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGCAGG ATGAACTGAA GGCGCTGGTG GCCCAGGCCG CCGCCGACTA CGTATTGGCC
AACGTGCCCG AGGGCGCCGT GCTGGGTGTC GGCACCGGTT CGACCGCCAA CCTGTTCATC
GACGCGATGG CGCCGCACAA GGCGCGCTTC GCCGGCGCGG TGTCGAGCTC GGAGGCGTCG
ACGCGCCGTC TGCAGGGCCA CGGTTTTGCC GTGCTGGATC TGAACGAGGT CGATACGATT
CCCGTCTACG TGGACGGTGC CGACGAGATC GATGACACGG GCGCCATGAT CAAGGGCGGC
GGCGGCGCGC TGACGCGCGA GAAGATCGTC GCGTCGGTGG CAGGACGGTT CGTCTGCATC
GCCGACGGCA GCAAGCTGGT CGATGTGCTC GGCGCTTTCC CGCTGCCGGT GGAAGTGGTG
CCGATGGCAC GCGCCGCAGT AGCGCGCCAG CTGGCGGCGC TGGGCGGCCA GCCGCGCCTG
CGCATGACCA AGGAAGGCCA GATCTACCAG ACCGACAACG GCAATGTGAT CCTGGATGTC
TCCGGCCTGC GGATCGGCGA GCCGAAGACG CTCGAGGCGC AGATCAACGA TATTCCCGGC
GTGGTGACGG TCGGCCTGTT CGCCAAGCGC GGCGCCGATG TGCTGCTGCT GGGCACCGAA
GCGGGCGTGC AGCGCCGCGA CTTCTGA
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| Protein sequence | MTQDELKALV AQAAADYVLA NVPEGAVLGV GTGSTANLFI DAMAPHKARF AGAVSSSEAS
TRRLQGHGFA VLDLNEVDTI PVYVDGADEI DDTGAMIKGG GGALTREKIV ASVAGRFVCI
ADGSKLVDVL GAFPLPVEVV PMARAAVARQ LAALGGQPRL RMTKEGQIYQ TDNGNVILDV
SGLRIGEPKT LEAQINDIPG VVTVGLFAKR GADVLLLGTE AGVQRRDF
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