| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1176 |
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| Symbol | |
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| ID | 1219992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1236244 |
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| End bp | 1237899 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637237546 |
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| Product | ABC transporter ATP-binding protein |
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| Protein accession | NP_519297 |
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| Protein GI | 17545895 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000161898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.341996 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCG TCGACCTGCG CTCGGCTAAG CCCGACTACG ATGGCCCGCT GCTGCGGCTG
GACGACCTGT CCGTGCGCTT CGAGGCCGAG CACAACGAGT GGATCGAGGC CGTCAGGCAC
GTCTCGTTCG ACCTGCACGC CGGCGAGCGC TTTGCGCTGG TGGGCGAGTC GGGCTCCGGC
AAGACGGTCA CGGCGCTGTC GATCATGCGC CTGCTGGCCG ACGCGCATTA CAGCGGCCGC
ATCCTGTTCG AGGGGCGCGA CCTGCTGGCC GCGAGCGAGC GCCAGATGCG CGGCCTGCGC
GGCGCCGACG TCGCGATGGT GTTCCAGGAG CCGATGACGG CGCTCAACCC GCTGTACACC
ATCGGCAACC AGATCGTCGA GACGCTGGAG CTGCACGAAG GCCTGGACAA GCGCGCCGCC
AAGGCCCGCG CGATCGCGCT GCTGGAGCAC ACCGGCATCG CCGAGGCACC GCGCCGCTTC
GATGCTTTCC CGCACCAGCT GTCCGGCGGC CAGCGGCAGC GTGCCATGAT CGCCATGGCG
CTCGCCTGCA GCCCCAAGCT GCTGGTCGCC GACGAGCCCA CCACCGCGCT GGACGTGACC
GTGCGCATGC AGATCCTGCA GCTGCTGCGC GACCTGCAGG CCGAATACGG CATGGCCGTG
ATGCTGATCA CGCACGACCT GAACATGGTG CGCGCCTTTG CTGAGCGCGT GGGCGTGATG
GAGCGGGGCG TGCTGGTGGA AACCGGCGAG ACGGCGACCG TCTTCAGCGC GCCGCAGCAT
CCCTACACAG TGCGCCTGCT GGAAAGCCGC CCGCAGCGCG ATGTGCTGCC GCTGGTGCCG
CTCGCTCCCG TGCTGCTGGA GGCCGACCAA CTGACGGTCA CCTACGATCG CCATCGCCCC
GGGTTTGCCG GCTGGTTCCG CGCCGATCCG TTCACCGCCG TCGACCAGGT CTCGCTGCAG
TTGCGCGAGG GCGAGACCCT GGGCATCGTC GGCGAGTCCG GTTCGGGCAA GACGACGCTG
GCGCAGACGC TGCTCGGGCT GCAGCGTCCG AAGGCGGGCG ATCTGCGCTT CCTCGGCAGT
TCGCTGCTGG GCCAAACGCG CGACGAGCGC CGCGCGGTGC GTGCCCGCAT GCAGGTGGTG
TTTCAGGACC CGTTCGGTTC GCTCTCGCCG CGCATGACCA TCGAGCAGAT CGTCGGCGAG
GGGTTGGCGC TGCATCAGCC GCACGTCAAC GACGCCGAGC GCCGCCAGCG CGTGATCGAG
GCGCTGCGCG AGGTCGGCCT GGACCGCACC GCCCTGGGAC GCTATCCGCA TGAGTTCTCC
GGCGGGCAGC GCCAGCGCAT CGCCATTGCG CGGGTGCTGA TCCTCAAGCC CCAGGTCCTG
GTGCTGGATG AGCCGACTTC GGCACTCGAC GTGTCGATCC AGCAGCAGGT GCTGTCGTTG
CTGTCCGCCC TTCAGAAAAA GTACAACCTG TCGTACCTGT TCATCAGCCA CGACCTCGCC
GTGATCCGTG CCATGTCGCA CCGGGTGATG GTGATGAAGG ACGGGAAGGT GGTGGAGGCG
GGCGACACGG AAGCCGTGCT GGAGTCACCG TCCCACCCCT ACACCTGCAA GCTGATGGCG
GCTGCGGCGC TCAAGCCGCT TCAGCCGCCG GGCTGA
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| Protein sequence | MTRVDLRSAK PDYDGPLLRL DDLSVRFEAE HNEWIEAVRH VSFDLHAGER FALVGESGSG
KTVTALSIMR LLADAHYSGR ILFEGRDLLA ASERQMRGLR GADVAMVFQE PMTALNPLYT
IGNQIVETLE LHEGLDKRAA KARAIALLEH TGIAEAPRRF DAFPHQLSGG QRQRAMIAMA
LACSPKLLVA DEPTTALDVT VRMQILQLLR DLQAEYGMAV MLITHDLNMV RAFAERVGVM
ERGVLVETGE TATVFSAPQH PYTVRLLESR PQRDVLPLVP LAPVLLEADQ LTVTYDRHRP
GFAGWFRADP FTAVDQVSLQ LREGETLGIV GESGSGKTTL AQTLLGLQRP KAGDLRFLGS
SLLGQTRDER RAVRARMQVV FQDPFGSLSP RMTIEQIVGE GLALHQPHVN DAERRQRVIE
ALREVGLDRT ALGRYPHEFS GGQRQRIAIA RVLILKPQVL VLDEPTSALD VSIQQQVLSL
LSALQKKYNL SYLFISHDLA VIRAMSHRVM VMKDGKVVEA GDTEAVLESP SHPYTCKLMA
AAALKPLQPP G
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