| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1175 |
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| Symbol | |
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| ID | 1219991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1235123 |
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| End bp | 1236247 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637237545 |
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| Product | transmembrane ABC transporter protein |
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| Protein accession | NP_519296 |
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| Protein GI | 17545894 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4239] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00089412 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.471731 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGT ACTCCCGCGC ATCCGTTCAT CCCGCCAATA CGGCGGCGCC TCACGCCGTG
CGCCATTCGC CGTCGCCGCT CAAGCGCGCG TGGCGGCGCT TCAAGCAGCA CCGGCTGGGG
TATTGGAGCC TGATCCTCTT TGTCGCGCTG TTCGTGCTGA GCCTGCTCAG CGAGGCGATC
TCCAATGACC GTCCGCTGGT GGTCAAGTAC CACGGCCAAT GGTATTTCCC GATCGTCAAG
ACGTATCCGG AAACCACCTT CGACGGCGAT TTCACGACAC CCACGGACTA CCTCGATCCG
TATATCCGCG ACAAGTTCAA CGCGCCGGGC AACTTCGCGC TCTATCCGCC CAATCCCTAT
TCGTACGAGA CGCTCAACTA TTTCGCCAAG GAGCCCAATC CGGCGCCGCC GTCGGCCGAG
AACTGGCTCG GCACGGACGA CCGCGGGCGC GATGTGTTCG CGCGACTGCT CTACGGCTTC
CGCGTGTCGG TGCTGTTCGG GCTGGCGCTG ACGCTGATCG GCGTGCTGGT CGGCACGCTC
ACCGGCGCGC TGATGGGCTT CTTCGGCGGG CGCTTCGATC TGGTGTCGCA GCGGCTGATC
GAAGTCTGGG GCTCGATGCC GGAGCTCTAC CTGCTGATCA TCTTCGCGTC GATCTTCGAG
CCGAGCCTGG GGCTGCTGAT CGTCCTGCTG TCCCTGTTCG GCTGGATGAG CCTGTCGGCC
TACGTGCGCG CCGAGTTCTA CCGCAACCGT TCGTTGGACT ACGTGAAGTC TGCCCGCGCG
ATGGGCCTGT CGGACGGGCA GATCATCCGG CGCCACATCC TGCCCAACAG CCTGACGCCG
ATCATCACCT TCCTGCCGTT CAACATGAGC GCGGCCATCC TGACGCTGAC CAGCCTCGAC
TTCCTCGGCC TGGGCGTGCC GCCGTCGATG CCCAGTCTCG GCGAGCTGCT GGCGCAGGGC
AAGGCCAACC TGGATGCGTG GTGGATTTCC CTGTCGACCT TTGTGACGCT GGTGCTGATC
CTGGTGCTGC TGACCTTCAT GGGCGACGCC CTGCGCGACG CCTTCGATAC ACGTCTGTCG
TTCGCGCAGC TGCGCGCGCG CCAGAAGCCG GCGGGGGTGA AATGA
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| Protein sequence | MTQYSRASVH PANTAAPHAV RHSPSPLKRA WRRFKQHRLG YWSLILFVAL FVLSLLSEAI
SNDRPLVVKY HGQWYFPIVK TYPETTFDGD FTTPTDYLDP YIRDKFNAPG NFALYPPNPY
SYETLNYFAK EPNPAPPSAE NWLGTDDRGR DVFARLLYGF RVSVLFGLAL TLIGVLVGTL
TGALMGFFGG RFDLVSQRLI EVWGSMPELY LLIIFASIFE PSLGLLIVLL SLFGWMSLSA
YVRAEFYRNR SLDYVKSARA MGLSDGQIIR RHILPNSLTP IITFLPFNMS AAILTLTSLD
FLGLGVPPSM PSLGELLAQG KANLDAWWIS LSTFVTLVLI LVLLTFMGDA LRDAFDTRLS
FAQLRARQKP AGVK
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