Gene RSc1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1170 
SymbolmesJ 
ID1219985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1227935 
End bp1229323 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content75% 
IMG OID637237539 
Productputative cell cycle protein 
Protein accessionNP_519291 
Protein GI17545889 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 
TIGRFAM ID[TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain
[TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0031509 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.791895 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGCTGG TCGACAAGGT CGCACAACGC GTCGTCGCGT GTGCGGCCTT TGTTGTTTCT 
GGCGGGGTGC CGACGGTCGC GGTTGCACTG TCGGGCGGGC GGGATTCCGC GGCGCTGCTG
CATGCCGTCG CTGCGTGGCG CGATGCCGCC GGCGTGCCGG TGCGGCTGGT CGCACTGCAC
ATCCACCATG GCCTGCAGGC CGATGCGGAT GCATGGGAGG CCGCCTGCGC GCGGATGGCC
GCCGCCGTTG GCGCCGCGTT CCGCGTGCGG CGCGTGCGGG TGTCCACAGA TGCCGGTCGC
GGCATCGAGG AAGCCGCGCG CGAAGCCCGT TACGCCGCGC TCGACGCGCT CTGCGCCGAG
ACCGGCGCCA CCCTCCTGCT GACCGCCCAC CACCTCGACG ACCAGGCCGA GACCGTGCTG
CTGCAATTGC TGCGCGGCGC CGGGCTCGAC GGCCTGTCGG CCATGCCGAT GGCGCGCGAG
CGCCGCGTGA CACTGCTGCG CCCCTGGCTG GACGTGCCGC GCGGCGACAT CGAAGCCTAT
GCCCGGGCCC ATGCGCTCGC GTGGGTCGAG GACCCCTCCA ATGGCGATGC CCGCTATGCC
CGCAACGCGC TGCGGCCGTT GCTGGCCGGC ATGGCCGGGC ATTTTCCTGC CTACCGGGCC
TCGCTGGCGC GCAGCGCGGC GCATCTGGCC GAGGCGGCGG CGCTGATCGA GGAGGTTGCG
CAGACCGATC TTGCGCGGAT CGCGCCGGCG GGCACGCTGG CGGTGGCCGG CCTGGCGGCG
CTGTCCGGGC CGCGTCAGCG CGCGGCGCTG CGGGCATGGC TGGCCGGGGC CGGGTTGCGT
GCGGTGTCGT CGCGGCGGCT GGAGGACTTG CGCGCGCAAC TGCTGGGTGC CCGTGCCGAC
GGCGCGCCGT GTGTCCGCCT GCCCGGCGCG CAAGTGCGGC GCTACCGCGG GCAGGCATGG
ATCGAGGCGG CCGGGCAGCC CGGGGCCGGG CCCGCGGATT GCCCGATCGC CGTCTCGCGG
TTCGATCCGG CCCGGGCCGA GGTGCAGCGG GTGGACGTGG CGGCGTGGGG CGGTGCGCTG
CTGTTTTCGC CGGCCCAGGC GGAAGGCATC GACGCACGGA TCCTGCAGGC GCCGCTGTCG
CTGGCCGCCC GGCGCGGCGG CGAGCGCATC GTGCTGCGGC CGGGCGGGCC ATCGCGGGCG
CTCAAGCAGG CCTATCAGGA GGCCGGCATT CCGGCGTGGG CGCGGGCTCG GCTGCCCTTG
CTGTATGCGG GCGAGCGGCT GGTCTTTGCC GCTGGGCTGG GCCCGGACCG GTCGGCTGTC
GCCATGGGCT CCGGCTGGCA TGTCGCCTGG CTGCCGGCAG TGGGCCAGGA CGGGCTGGAT
GCGGGTTGA
 
Protein sequence
MLLVDKVAQR VVACAAFVVS GGVPTVAVAL SGGRDSAALL HAVAAWRDAA GVPVRLVALH 
IHHGLQADAD AWEAACARMA AAVGAAFRVR RVRVSTDAGR GIEEAAREAR YAALDALCAE
TGATLLLTAH HLDDQAETVL LQLLRGAGLD GLSAMPMARE RRVTLLRPWL DVPRGDIEAY
ARAHALAWVE DPSNGDARYA RNALRPLLAG MAGHFPAYRA SLARSAAHLA EAAALIEEVA
QTDLARIAPA GTLAVAGLAA LSGPRQRAAL RAWLAGAGLR AVSSRRLEDL RAQLLGARAD
GAPCVRLPGA QVRRYRGQAW IEAAGQPGAG PADCPIAVSR FDPARAEVQR VDVAAWGGAL
LFSPAQAEGI DARILQAPLS LAARRGGERI VLRPGGPSRA LKQAYQEAGI PAWARARLPL
LYAGERLVFA AGLGPDRSAV AMGSGWHVAW LPAVGQDGLD AG