Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1147 |
Symbol | |
ID | 1219962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1202919 |
End bp | 1203704 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637237516 |
Product | hypothetical protein |
Protein accession | NP_519268 |
Protein GI | 17545866 |
COG category | [R] General function prediction only |
COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.385681 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTGA GATTCGCCAG TCTCGGCAGC GGCAGCGACG GTAATGCGCT GCTCGTCGAA TCCACCGATG GAACGACGAG CACGCGCATC CTGCTCGATT GCGGATTCGG TATCCGCGAG ACCGTGCGCC GGCTTGAACG CCTGGGCTGC GCGCCGGCGT CCCTCGACGC CATTCTCGTC ACGCACGAGC ATGGCGACCA TATCGGCAGC GCCTATGCGT TCGCCGCCAA ATACAGTGTT CCGGTCTGGA CCAGCCACGG CACGTATCGC GCCACGGCAT CGCTGCGCGG CGCCGACCGG GCCGCCGTCC GTTTCTGCCG TGCCGACGAT GCCTTCAGCA TCGGCGATCT GCGGATCCTG CCCTACACCG TGCCACACGA TGCGCGCGAG CCCTTGCAGT TCATCTTCGA CGACGGCGCG CGGCGCCTCG GTGTGCTGAC GGATGCCGGC ATGTCGACGG AGTACCTGTG CGGGCACCTG ACCGGTCTGC ATGCCTTCGT GCTCGAATGC AATCACGACC GTGAGATGCT GGCCAACTCG GCGTATCCGT GGTCATTGAA GCAGCGGATC GGGGGAGACT TCGGGCACCT GGCCAATGAC ATCGCGGCGG CGATCCTGGC GCGCGTCCGG CACGACGGTC TTCATACCGT CGTGGCCGCG CATCTTTCCA AGCAGAACAA CACGCCCGAG CTGGCGGCGG CGGCGATCGC GTCGGCGCTG GGCGTGCCTG CGGGCGACGT GCCGATCGCG GATCAGGAAG CGGGCCTCGG CTGGCAAGCC GTCTGA
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Protein sequence | MAVRFASLGS GSDGNALLVE STDGTTSTRI LLDCGFGIRE TVRRLERLGC APASLDAILV THEHGDHIGS AYAFAAKYSV PVWTSHGTYR ATASLRGADR AAVRFCRADD AFSIGDLRIL PYTVPHDARE PLQFIFDDGA RRLGVLTDAG MSTEYLCGHL TGLHAFVLEC NHDREMLANS AYPWSLKQRI GGDFGHLAND IAAAILARVR HDGLHTVVAA HLSKQNNTPE LAAAAIASAL GVPAGDVPIA DQEAGLGWQA V
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