Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1135 |
Symbol | |
ID | 1219950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1192363 |
End bp | 1193286 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637237504 |
Product | putative hydrolase protein |
Protein accession | NP_519256 |
Protein GI | 17545854 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTCCA CCACCCCCAC GCTACCGGCC GCGCGTCTGG CTTCCCGCTC GACCTATCTG CCCGTGCGCG GCTTGCGCTA CCACATCCGC GAATGGGGCG AGCCGGGCGC GCCGATCCTG TTCCTGTTCC ACGGGTGGAT GGATGTGTCG GCCTCGTTCC AGTTCCTGGT GGAGGCGTTG CGCGAGCGCT GGCATGTCGT CGCGCCGGAC TGGCGCGGCT ACGGCCTGAC CGCGTGGGCG ACCGACGCGC CCGGTGTCGA TTCGTACTGG TTCGCCGATT ACCTGGCCGA CCTGGAGGCC ATCGTCGATC ACTATCAGCC GGATGGCCAG GTCACTCTGG TCGGCCACAG CCTGGGCGCC AACGTGGTGT GCCTCTACGC CGGCGTGCGG CCCGAGCGCG TGCGCCGCGT GGTCGACCTG GAAGGCTTCG GCATGCCCGC GTCCAGGCCG TCGCAGGCCG CGCGCCGCTA TGCACGCTGG CTCGACGAAC TGAAGGACAA GCCGCGCCTG ATCACCTATG CCACCCTCGA CGACGTGGCC GCCCGGCTGC AGAAGACCAA CCCGCGCCTG CCGGCCGACA AGGCGGCCTT CCTGGCGCGG CACTGGTCGC GCCAGAACGC GGACGGCCGC TGGGAAATCC TCGGCGATCC CGCCCACAAG ATCGTCAACC CGCAGCTGTA CCGGCTCGAT GAGGTGATGG AGATCTGGCG CCGCGTGGCC GCGCCCGTGC TGCACGTCGA GGCGGTCGAT TCTCCGACGC TGATCGCGCT GGCGGGCGAC GTGCCGCTGC CCGAGTTCAG GTCGCGCTTC GCGGCGTTCC CGGATTTGCG CGAAGCGAGG ATCACCGATG CGGGCCACAT GCTGCATCAT GACCAGCCGG AGCAGGTGGC GGCACTGGTG GAGGCCTTCT GCAAGGCGGC GTGA
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Protein sequence | MDSTTPTLPA ARLASRSTYL PVRGLRYHIR EWGEPGAPIL FLFHGWMDVS ASFQFLVEAL RERWHVVAPD WRGYGLTAWA TDAPGVDSYW FADYLADLEA IVDHYQPDGQ VTLVGHSLGA NVVCLYAGVR PERVRRVVDL EGFGMPASRP SQAARRYARW LDELKDKPRL ITYATLDDVA ARLQKTNPRL PADKAAFLAR HWSRQNADGR WEILGDPAHK IVNPQLYRLD EVMEIWRRVA APVLHVEAVD SPTLIALAGD VPLPEFRSRF AAFPDLREAR ITDAGHMLHH DQPEQVAALV EAFCKAA
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