Gene RSc1135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1135 
Symbol 
ID1219950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1192363 
End bp1193286 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content70% 
IMG OID637237504 
Productputative hydrolase protein 
Protein accessionNP_519256 
Protein GI17545854 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTCCA CCACCCCCAC GCTACCGGCC GCGCGTCTGG CTTCCCGCTC GACCTATCTG 
CCCGTGCGCG GCTTGCGCTA CCACATCCGC GAATGGGGCG AGCCGGGCGC GCCGATCCTG
TTCCTGTTCC ACGGGTGGAT GGATGTGTCG GCCTCGTTCC AGTTCCTGGT GGAGGCGTTG
CGCGAGCGCT GGCATGTCGT CGCGCCGGAC TGGCGCGGCT ACGGCCTGAC CGCGTGGGCG
ACCGACGCGC CCGGTGTCGA TTCGTACTGG TTCGCCGATT ACCTGGCCGA CCTGGAGGCC
ATCGTCGATC ACTATCAGCC GGATGGCCAG GTCACTCTGG TCGGCCACAG CCTGGGCGCC
AACGTGGTGT GCCTCTACGC CGGCGTGCGG CCCGAGCGCG TGCGCCGCGT GGTCGACCTG
GAAGGCTTCG GCATGCCCGC GTCCAGGCCG TCGCAGGCCG CGCGCCGCTA TGCACGCTGG
CTCGACGAAC TGAAGGACAA GCCGCGCCTG ATCACCTATG CCACCCTCGA CGACGTGGCC
GCCCGGCTGC AGAAGACCAA CCCGCGCCTG CCGGCCGACA AGGCGGCCTT CCTGGCGCGG
CACTGGTCGC GCCAGAACGC GGACGGCCGC TGGGAAATCC TCGGCGATCC CGCCCACAAG
ATCGTCAACC CGCAGCTGTA CCGGCTCGAT GAGGTGATGG AGATCTGGCG CCGCGTGGCC
GCGCCCGTGC TGCACGTCGA GGCGGTCGAT TCTCCGACGC TGATCGCGCT GGCGGGCGAC
GTGCCGCTGC CCGAGTTCAG GTCGCGCTTC GCGGCGTTCC CGGATTTGCG CGAAGCGAGG
ATCACCGATG CGGGCCACAT GCTGCATCAT GACCAGCCGG AGCAGGTGGC GGCACTGGTG
GAGGCCTTCT GCAAGGCGGC GTGA
 
Protein sequence
MDSTTPTLPA ARLASRSTYL PVRGLRYHIR EWGEPGAPIL FLFHGWMDVS ASFQFLVEAL 
RERWHVVAPD WRGYGLTAWA TDAPGVDSYW FADYLADLEA IVDHYQPDGQ VTLVGHSLGA
NVVCLYAGVR PERVRRVVDL EGFGMPASRP SQAARRYARW LDELKDKPRL ITYATLDDVA
ARLQKTNPRL PADKAAFLAR HWSRQNADGR WEILGDPAHK IVNPQLYRLD EVMEIWRRVA
APVLHVEAVD SPTLIALAGD VPLPEFRSRF AAFPDLREAR ITDAGHMLHH DQPEQVAALV
EAFCKAA