| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1118 |
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| Symbol | lolD |
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| ID | 1219933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1175005 |
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| End bp | 1175739 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637237487 |
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| Product | lipoprotein releasing system ATP-binding ABC transporter |
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| Protein accession | NP_519239 |
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| Protein GI | 17545837 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.107348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.208318 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGAGG CCGTGATGAC CGCCAACGAG ACCACGCACC GCGCCGAGTG GGGTGATACC
GCGGTGCTGC AGGCGCAGGG ACTGGTCAAG GCGTTCAGGC AGGGGGGGCT GAATGTCGAT
GTGCTCAGGG GCGTCGACAT CCGCATCGGC GTGGGCGAGA AGGTCGCCAT CGTCGGCGCG
TCGGGCTCGG GCAAGAGCAC GCTGCTGCAT GTGCTGGGCG GGCTGGACGT GCCCACCTCG
GGCCGCGTGT CGCTGCTCGG CAAGCCGTTC ACCGCCATGA GCGAGCGCGA GCGCAATACG
CTGCGCAACC GCGCGCTGGG CTTCGTCTAC CAGTTCCACC ACCTGCTGCC GGAGTTCACC
GCGCTCGACA ACGTCGCCAT GCCGCTGCGC ATCCGCGGCG AGAACGAGGC GCAGGCGCGC
CATACCGCGC AGGCCATGCT GGCGCGCGTG GGCCTGGGCG AGCGCACGGC GCACCGGCCG
GGCGAGCTGT CCGGCGGCGA GCGCCAGCGG GTGGCGATCG CGCGCGCGCT GGTGGGCTCG
CCCGCCTGCG TGCTGGCCGA CGAGCCCACC GGCAACCTCG ACGACCACAC CGCCGGCGAG
GTCTTCGACC TGATGCTGGA GCTGACGCGC ACGCTCGGCA CCAGCTTCGT CATCGTCACG
CACGATATCG ACCTGGCCGG ACGCTGCGAT CGCATCCTGC GGCTGCGCGA CGGGCATCTG
CACCAGGAAC GGTAA
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| Protein sequence | MSEAVMTANE TTHRAEWGDT AVLQAQGLVK AFRQGGLNVD VLRGVDIRIG VGEKVAIVGA
SGSGKSTLLH VLGGLDVPTS GRVSLLGKPF TAMSERERNT LRNRALGFVY QFHHLLPEFT
ALDNVAMPLR IRGENEAQAR HTAQAMLARV GLGERTAHRP GELSGGERQR VAIARALVGS
PACVLADEPT GNLDDHTAGE VFDLMLELTR TLGTSFVIVT HDIDLAGRCD RILRLRDGHL
HQER
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