Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1112 |
Symbol | |
ID | 1219925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1168754 |
End bp | 1169173 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637237479 |
Product | putative transcription regulator protein |
Protein accession | NP_519233 |
Protein GI | 17545831 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0169999 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.208318 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCAGCG CGCGGCGCAC GCTCGCCCGG CGCTTCGACG AAGCCTTGCG GCCGCTGGAC CTGACCAATG GGCAGTTCTC GCTGCTGATG TCGCTGAACC GACCGCAGCC CGCGTCGATG GGCGAAGTGG CCGAACTGCT GGCGATAGAC CGGACCACGC TCACCGCGGC GCTCAAGCCG CTGGAGCGCC GCGGCCTGGT GGCGATCGAG GCGAACCCGG CCGATCGGCG CAGCCGGCTG CTGCGCCTGC GCCCGGCCGG CCTGAAGGCG CTGACCCGCG CACTGCCGGT CTGGCAGGCA CTGCACGGTG AGATCGACGG CACCCTCGCG CACGCCGAAG CGCAACGCCT GCGCGACAAC CTGCGGACCC TGACGAGCGA CACCCGCGTC AGCCCGCCAG CCAGCGCACC CCGGCGTTGA
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Protein sequence | MCSARRTLAR RFDEALRPLD LTNGQFSLLM SLNRPQPASM GEVAELLAID RTTLTAALKP LERRGLVAIE ANPADRRSRL LRLRPAGLKA LTRALPVWQA LHGEIDGTLA HAEAQRLRDN LRTLTSDTRV SPPASAPRR
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