Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1102 |
Symbol | soxD2 |
ID | 1219914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1158859 |
End bp | 1159155 |
Gene Length | 297 bp |
Protein Length | 98 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637237468 |
Product | sarcosine oxidase subunit delta |
Protein accession | NP_519223 |
Protein GI | 17545821 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4311] Sarcosine oxidase delta subunit |
TIGRFAM ID | [TIGR01374] sarcosine oxidase, delta subunit family, heterotetrameric form |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.123321 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCTGA TCGAATGTCC GTGGTGCGGG CCGCGCGCCG AATCCGAGTT CACGTGCGGC GGCGAAGCCG ACATCGTGCG CCCGGTCGCC AACGAGAACA TGAGCGACCG TGAATGGGGT GATTACGTGT TCATGCGCGA GAACAAGCGC GGCCTGCACC GCGAGCAATG GCTGCACACG CAGGGTTGCC GCCGCTGGTT CAAGGTCGAG CGCGACACGC TCACCTACGA GATCAAGGGC TACGAAACGT TTGGCGGCAT CGCCGCCCGT GCAAACGAAG GGGGCGCCAG CAAATGA
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Protein sequence | MLLIECPWCG PRAESEFTCG GEADIVRPVA NENMSDREWG DYVFMRENKR GLHREQWLHT QGCRRWFKVE RDTLTYEIKG YETFGGIAAR ANEGGASK
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