Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1049 |
Symbol | plsX |
ID | 1219858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1102627 |
End bp | 1103691 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637237412 |
Product | putative glycerol-3-phosphate acyltransferase PlsX |
Protein accession | NP_519170 |
Protein GI | 17545768 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0416] Fatty acid/phospholipid biosynthesis enzyme |
TIGRFAM ID | [TIGR00182] fatty acid/phospholipid synthesis protein PlsX |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.901724 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.891913 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATCA AGCTTGCCAT CGACTGCATG GGTGGCGATC ACGGCGTTGC CGTGACGATC CCAGCAGCGA TCCAATTTCT CGCCGCACAC GAAGACGTCG AAATGCTGCT TGTCGGGCAG CCCGATGTCA TCGCGGCGGA GCTCAAGCGA CTTCACGCCA CGGCGCACTC CCGCATTCAC GTCGTCGCCG CCTCCGAGGT GGTGTCGATG GACGATCCGG TTGAGGTCGC GCTGCGCAAG AAGAAGGATT CTTCGATGCG CGTGGCCATC AAGCAGGTCA AGGACGGCGC CGCGCAGGCA TGCGTGTCTG CCGGCAACAC CGGCGCCCTG ATGGCCGTGT CGCGCTATGT CCTGAAGACG CTGGACGGCA TTGATCGTCC GGCCATCGCC ACCGCCATTC CCAATGAGAA GGGCGCAGGC ACCACCGTGC TCGACCTCGG CGCCAATGCC GACTGCGAGC CCGCGCACCT GCTGCAATTC GCGCAGATGG CGTCCGCCAT GGTGTCGGTG GTCGAACACA AGCCGCGTCC CACGGTCGGT CTGCTCAATA TCGGCGAAGA GGTCATCAAG GGCAACGAGG TCGTCAAGCA GGCGGGCGAA CTGCTGCGCG CGTCCGATCT CAACTTCTTC GGCAATGTCG AAGGCAACGA TATCTTCAAG GGCACGACCG ACATCGTCGT CTGCGATGGC TTTGTCGGCA ACGTGGCGCT CAAGAGTACC GAGGGCCTGG CCAAGATGAT CGGCGCGATG CTGCGCGAAG AGTTCAGTCG CTCGTGGTTC ACCAAGCTGC TGGCGATAGT GGCGTTGCCC GTGCTGACGC GCTTCAAGCG CCGGGTCGAC CACCGCCGCT ACAACGGCGC GGCGCTGCTC GGCCTGCGCG GGCTCGTCAT CAAGAGCCAC GGCTCGGCCG ATGCCTATGC GTTCGAGTGG GCGATCAAGC GCGCCTACGA TGCCGCGGCC AATGGTGTGA TTGCCCGCAT CGCGCAGGCA TTCGAATCCC ATCATGACCC GGCGGGCGCC GCGGTGCCGC TTTCCACCTC CGCTCCGGCC GCCGACGCCG CATAA
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Protein sequence | MTIKLAIDCM GGDHGVAVTI PAAIQFLAAH EDVEMLLVGQ PDVIAAELKR LHATAHSRIH VVAASEVVSM DDPVEVALRK KKDSSMRVAI KQVKDGAAQA CVSAGNTGAL MAVSRYVLKT LDGIDRPAIA TAIPNEKGAG TTVLDLGANA DCEPAHLLQF AQMASAMVSV VEHKPRPTVG LLNIGEEVIK GNEVVKQAGE LLRASDLNFF GNVEGNDIFK GTTDIVVCDG FVGNVALKST EGLAKMIGAM LREEFSRSWF TKLLAIVALP VLTRFKRRVD HRRYNGAALL GLRGLVIKSH GSADAYAFEW AIKRAYDAAA NGVIARIAQA FESHHDPAGA AVPLSTSAPA ADAA
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