Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1047 |
Symbol | |
ID | 1219856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1101589 |
End bp | 1102128 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637237410 |
Product | hypothetical protein |
Protein accession | NP_519168 |
Protein GI | 17545766 |
COG category | [R] General function prediction only |
COG ID | [COG1399] Predicted metal-binding, possibly nucleic acid-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.785486 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATTTTC GTGCATTCGA TCTTTTCGCG TTCATCCGCG GCGGCGAGCA GGTGAGCGGT AGTCTCGGCT TGGCCGAGAT GCCGCGTCTG CTGGCTGAGC AGGCTGCCGA TGTGTCTACC GATGCGGGCA ACCTCTTCCG CTGGCGGATG CAGGGTGTCA TGCGCGACGA AGCGGTCGCC GCGGGTCAGT CGCCTCGTCA GCGTCTCTTC GTCGATCTGG AGGTGGGTGG CGCCGTGTGG CTGCAATGCC AGCGTTGCCT GCATGCCTAT GAGCAGCCGC TGTCGGTGCG CACGCGCCTG GAAGTCGTTC GTTCGGAGTC GGAGGCCGAT GCGGCCCCGC TGGACGACGA CGAGGCGGAT GTCATCGTCG GTTCGCGCGA CTTCGACCTG ATCTCGCAGA TCGAAGACGA GCTGCTGCTG GCGTTGCCGG TGTCGCCGCG TCACGAAACC TGTCCGGACG CGGTGGAGCC GGAAGCGGTG GAAGCCGAAA AGAAGCAGTC GCCGTTCGCG GTGCTGGCAA ACCTGAAGAC AAAACATTAG
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Protein sequence | MNFRAFDLFA FIRGGEQVSG SLGLAEMPRL LAEQAADVST DAGNLFRWRM QGVMRDEAVA AGQSPRQRLF VDLEVGGAVW LQCQRCLHAY EQPLSVRTRL EVVRSESEAD AAPLDDDEAD VIVGSRDFDL ISQIEDELLL ALPVSPRHET CPDAVEPEAV EAEKKQSPFA VLANLKTKH
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