Gene RSc1047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1047 
Symbol 
ID1219856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1101589 
End bp1102128 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content64% 
IMG OID637237410 
Producthypothetical protein 
Protein accessionNP_519168 
Protein GI17545766 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.785486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATTTTC GTGCATTCGA TCTTTTCGCG TTCATCCGCG GCGGCGAGCA GGTGAGCGGT 
AGTCTCGGCT TGGCCGAGAT GCCGCGTCTG CTGGCTGAGC AGGCTGCCGA TGTGTCTACC
GATGCGGGCA ACCTCTTCCG CTGGCGGATG CAGGGTGTCA TGCGCGACGA AGCGGTCGCC
GCGGGTCAGT CGCCTCGTCA GCGTCTCTTC GTCGATCTGG AGGTGGGTGG CGCCGTGTGG
CTGCAATGCC AGCGTTGCCT GCATGCCTAT GAGCAGCCGC TGTCGGTGCG CACGCGCCTG
GAAGTCGTTC GTTCGGAGTC GGAGGCCGAT GCGGCCCCGC TGGACGACGA CGAGGCGGAT
GTCATCGTCG GTTCGCGCGA CTTCGACCTG ATCTCGCAGA TCGAAGACGA GCTGCTGCTG
GCGTTGCCGG TGTCGCCGCG TCACGAAACC TGTCCGGACG CGGTGGAGCC GGAAGCGGTG
GAAGCCGAAA AGAAGCAGTC GCCGTTCGCG GTGCTGGCAA ACCTGAAGAC AAAACATTAG
 
Protein sequence
MNFRAFDLFA FIRGGEQVSG SLGLAEMPRL LAEQAADVST DAGNLFRWRM QGVMRDEAVA 
AGQSPRQRLF VDLEVGGAVW LQCQRCLHAY EQPLSVRTRL EVVRSESEAD AAPLDDDEAD
VIVGSRDFDL ISQIEDELLL ALPVSPRHET CPDAVEPEAV EAEKKQSPFA VLANLKTKH