Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0990 |
Symbol | hptG |
ID | 1219799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1041349 |
End bp | 1043271 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637237353 |
Product | heat shock protein 90 |
Protein accession | NP_519111 |
Protein GI | 17545709 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0326] Molecular chaperone, HSP90 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0890084 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.343937 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGCAC CGCACGAGAA GATGGCGTTC CAGGCAGAGG TCAAGCAGCT TCTGCATCTG ATGATCCATT CCCTGTACAG CAACAAGGAA ATCTTTCTGC GCGAGCTGGT CTCCAACGCG TCCGACGCCG TGGACAAGCT GCGCTTCGAG GGCATCGCCG ACCCATCGCT GCTCGAAGGC GGCGGCGAGC TGGGCATCCG CATCGGTTTC GATGCCCAGG CCCGCACCGT CACCATCGCC GACAACGGCA TCGGCATGAG CCGCGACGAG GCCATCCGCA ACCTCGGCAC CATCGCCCGC TCGGGCACGC GCGAGTTCTT CAGCCAGCTC TCCGGCGATC AGCAGAAAGA CGCGGCGCTG ATCGGCCAGT TCGGGGTCGG CTTCTATTCG GCCTTCATCG TCGCCGACCG CGTGACGGTG GAATCGCGCC GTGCGGGCGT GCCCGCCGCC GAAGGCGTGC GCTGGGAAAG CGCGGGCGAC GGCGAGTTCA CCGTCGATGC CATCGAGCGC GCCGAGCGCG GCACCACCAT CACGCTGCAC CTGCGCGAGG GCGAGGACGA TTTCCTCTCC GCCTGGCGCC TGAAGTCCAT CGTGCAGAAG TACTCGGACC ACATCTCCCT GCCGATCGCG ATGCGCAAGG AGAGCTGGGA CGAAGAGAAG AAAGAGATGG TCGCGCAGGA CGAATGGGAG ACCATCAACC AGGCCAGCGC CCTGTGGGCC CGCCCGCGCG CCGACGTGAC CGACGAGCAG TACATCGCCT TCTACCAGCA CATCGCACAC GAGCAGGGCC AGCCGCTGGC GTGGACGCAC AACCGCGTCG AAGGCCGCAG CGAATACACG CAGCTGCTGT ACCTCCCGAC CAACGCGCCG TTCGACCTGT GGGACCGCGA GCGCCGCAGC GGCCTGAAGC TGTACGTCAA GCGCGTCTTC ATCATGGACG ACGCCGAACA GCTGCTGCCG GCCTACCTGC GCTTCGTCAA GGGCGTGATC GACTCGGCCG ACCTGCCGCT GAACGTCTCG CGCGAGATCC TGCAGGAGAG CCGCGACGTG AAGGCCATCC GAGAGGGCTC GACCAAGCGC GTGCTGGGCA TGCTCGAATC GATGGCCGAC TCGGATGACG CCGCCGAAAA GGACAAGTAC GCCACCTTCT GGCAGCACTT CGGCCAGGTG CTCAAGGAAG GCCTCGGCGA AGACTTCGCC AACAAGGACC GTATCGCCAA GCTGCTGCGC TTTGCTTCCA CGCACAACGC AGGGGACGAG CAGACCGTCT CGCTGGCCGA CTACATCGGC CGCATGAAGG ACGGCCAGGA CAAGATCTAC TACGTGAGCG CCGAGAACTG GACGGCCGCC AAGTCCGGCC CGCACCTGGA GGTGTTCCGC AAGAAGGGCG TGGAAGTGTT GCTGCTGACC GACCGCGTGG ACGAATGGAT GCTGTCGTTC CTGCACGACT TCGAAGAGAA GGCGCTGGTG TCGGTCGCGC GCGGCGGGCT GGACCTCGGC GCGCTGGAAG ACGAAGCCGA GCGCGCCGAG CACGCCAAGG TGGAAGGCGA GTTCAAGCCG CTGGTGGACC GCGCCAAGGC GGTGCTGGCC GACAAGGCCA AGGACGTGCG CATCACGCAT CGCCTGACCG ATTCGCCGTC GTGCCTGGTG GCCGACGAGG GCGACATCAG CGGCACGCTG GCGCGCCTGC TCAAGCAGGC CGGCCAGAAG GCGCCCGACA CCAAGCCCGT GCTGGAACTG AACCCGGCAC ACCCGCTGGT GCGCAAGCTG GCGTTGCTCG AATCCGTCAC CGGCGGCGAG GCCGACCGCG CTGCGTTCGA GGATCGCCTG CACGTGCTGT TCGACCAGGC GCTGCTGGCC GAGGGCGGCT CGCTGGCCGA TCCGGCCGAC TACGTGCAGC GCGTCAACCG CCTGCTGGCC TGA
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Protein sequence | MGAPHEKMAF QAEVKQLLHL MIHSLYSNKE IFLRELVSNA SDAVDKLRFE GIADPSLLEG GGELGIRIGF DAQARTVTIA DNGIGMSRDE AIRNLGTIAR SGTREFFSQL SGDQQKDAAL IGQFGVGFYS AFIVADRVTV ESRRAGVPAA EGVRWESAGD GEFTVDAIER AERGTTITLH LREGEDDFLS AWRLKSIVQK YSDHISLPIA MRKESWDEEK KEMVAQDEWE TINQASALWA RPRADVTDEQ YIAFYQHIAH EQGQPLAWTH NRVEGRSEYT QLLYLPTNAP FDLWDRERRS GLKLYVKRVF IMDDAEQLLP AYLRFVKGVI DSADLPLNVS REILQESRDV KAIREGSTKR VLGMLESMAD SDDAAEKDKY ATFWQHFGQV LKEGLGEDFA NKDRIAKLLR FASTHNAGDE QTVSLADYIG RMKDGQDKIY YVSAENWTAA KSGPHLEVFR KKGVEVLLLT DRVDEWMLSF LHDFEEKALV SVARGGLDLG ALEDEAERAE HAKVEGEFKP LVDRAKAVLA DKAKDVRITH RLTDSPSCLV ADEGDISGTL ARLLKQAGQK APDTKPVLEL NPAHPLVRKL ALLESVTGGE ADRAAFEDRL HVLFDQALLA EGGSLADPAD YVQRVNRLLA
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