| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0989 |
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| Symbol | |
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| ID | 1219798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1039746 |
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| End bp | 1041218 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637237352 |
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| Product | putative transcription regulator protein |
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| Protein accession | NP_519110 |
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| Protein GI | 17545708 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0613071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.192866 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCTT CCTCCCCGAT CGTCAGCCTG GATGCCAGGC GTACCGCCGC CCGTCCGGCC
GCGGAGCAGT TGCCCGACCC GATTCCCTCG GCGCAGATGA CGCTGGTCGA CCAGTTGACC
GAGTGGGCGC GCATGCGCAT CGACGAGCGC GTGTTCCGCG CCGGCATGCG CATGCCGTCG
ATCCGCCAAC TGGCCCAGGA GAAGAGCATC TCGCGCTTCA CCGTGGTGGA GGCCTATGAG
CGGCTGGTGG CGCAGGGGTA TCTCGAATCG CGGCGCGGCT CGGGCTTCTA CGTGAAGGAG
CGCCAAGCGC CGCTGCCCGA GGAGCCGCCG GCGCCGCCCG CCAGCGCGCG CAAGATCGAC
GTGGCCTGGC TGCTGCGCAA CATGTTCCAC TCGGCCGAGC CGCGCAAGGC GCCGGGCATC
GGCTTCCTGC CCAACGGCTG GCTGGACGGC GAACTGATCG CCAACGCGCT GCGCGCCCTG
GGCCGGCAGA ACGGCAACCA GTTCCTGGCC TGGGGCACGC CGCAGGGCTT CCTGCCGCTG
CGCCAGCAGC TGCAGACGCG GCTGGCCGAG CTGGAGATCG GCGCGCGCCC CGACCAGATC
GTCATGACCT CCGGCATCAC CCAGTCGCTC GACCTGATCG CGCGCCAGTA CGTGCAGCCG
GGCGACACGG TGCTGGTGGG CGATCCGGCA TGGTTCCTGA TGTTCGGCCG CTTCGCCGCG
CAGGGCGCGC AGGTGATCGG CGTGCCGTAC ACCACCGAGG GGCCGGACCT GGTGGCGCTC
GAAGGGCTGG TGCAGGTGCG CCGACCCAAG CTGCTGGTGA TCAATTCGGT GCTGCACAAC
CCGACCGGCA CCTCGCTGTC GGCGGCCAAG GCGTTCCAGC TGTTGCGGCT GGCCGAGCAG
TACGGATTCC TGATCGTCGA AGACGACATC TACGGCGACC TGGCCCCGCC CGGGCACCCG
GCCACGCGGC TGGCGAGCCT GGACCAGCTG CGCCGGGTGA TCTACCTCGG CAGCTTTTCC
AAGACGCTGG CGGCCAACCT GCGCGTGGGC TTCATCGCCT GTCATCCGGA GCTGGCCAAG
AACCTGACCG ACGGCAAGCT GCTGGCCGGG CTCGCCACGC CGGAGATCAA CGAGCGCGTG
CTCTACAAGG TGCTGACCGA AGGTCAGTAC CGCAAGCACG TCGAGCGCGT GCGCGCCCGG
CTCGACCGCG CCCGCGACGG CGTGCAGCGC AGCCTGGAGC GCCTGGGCCT GAAGCTGTTC
GCGCAGCAGG GCGCCGGCAT GTTCATCTGG GCCGACACCG GCCGCGACAC CAACGCCATC
GCCCGCGCCG GGCACGAAGA GGGTTACGTG TTCGCGCCGG GCAGTCTGTT CTCGCCGTCG
CAGATGCCCT CGACCTGGAT GCGCTTCAAT ATTGCCACCA GCACCGATCC GGAGATGCTG
CGCTTCCTGG CGGATCAGCT CGAGCGCGGC TGA
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| Protein sequence | MTPSSPIVSL DARRTAARPA AEQLPDPIPS AQMTLVDQLT EWARMRIDER VFRAGMRMPS
IRQLAQEKSI SRFTVVEAYE RLVAQGYLES RRGSGFYVKE RQAPLPEEPP APPASARKID
VAWLLRNMFH SAEPRKAPGI GFLPNGWLDG ELIANALRAL GRQNGNQFLA WGTPQGFLPL
RQQLQTRLAE LEIGARPDQI VMTSGITQSL DLIARQYVQP GDTVLVGDPA WFLMFGRFAA
QGAQVIGVPY TTEGPDLVAL EGLVQVRRPK LLVINSVLHN PTGTSLSAAK AFQLLRLAEQ
YGFLIVEDDI YGDLAPPGHP ATRLASLDQL RRVIYLGSFS KTLAANLRVG FIACHPELAK
NLTDGKLLAG LATPEINERV LYKVLTEGQY RKHVERVRAR LDRARDGVQR SLERLGLKLF
AQQGAGMFIW ADTGRDTNAI ARAGHEEGYV FAPGSLFSPS QMPSTWMRFN IATSTDPEML
RFLADQLERG
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