Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0951 |
Symbol | |
ID | 1219759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 999181 |
End bp | 1000479 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637237313 |
Product | hypothetical protein |
Protein accession | NP_519072 |
Protein GI | 17545670 |
COG category | [S] Function unknown |
COG ID | [COG1262] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR03440] conserved hypothetical protein TIGR03440 |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.508741 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAAT TCTTTATGCT CCCCGACCCG ACGTTCATCG GGGCGCTTTC CGACTGGAAC GATGGGCGCC GCTTGCCGCG CCAGGGCATC GCCCACAGCC TGGTCGATGC GCGCAACCGA ACGCTGGCCC TGCTGGCCGC CTTCGGCGAT ACGCAGCGCG GCTGGCAGAT CGAGCGCGTG CTCCATCATG CGCCGCCACT GTGGACGCTC GGGCAACTGG CCTGGTTTGC CGAATTCTGG TGTCTGCGCG AGCCGCGCCG TGTCGGTGAG GACGCGGTCG AGGACGGCGG CGGCACCGAA TGGGCGCTGC CGCGCTGGCA GGCGACCCTG CCGGCCGGGC TGGACGGTGC CGACAGCTTT TTCGACATGG ACCGCATGCC GCCCGACGCC TGCTGGGCGC TGACGCTGCC GGGCATCGCG ACGATCAAGC AGTACGCGCA CGATGTCCTC GACCGCGTGC TGCGCAAGCT GGCGACGCTC GGCACCGATG AGGACGCGGC GCTCGAGCCG TTCCGCTGGG CGGTGTTCCA TGAAGACTTG CGCGCCGAGC ATCTGCATGG CCTGCTGCAG GTCCTGGGGT TGCAGCCGGC CGGGCAGCCG CCGCTGGCGG CCGTGGTGGT GCCCGCCGCG CGGACGCTGT CCCTGCCCGG CGGCCGCTTC CAGATGGGGT GGCCCGATGC CGACGGCTTC GTGTTCGACA ACGAGTGTCC GCCGCACCGG ACCTACGTGC CGGCCTTCGA GATCGACGCG CAGCCAGTCA CCAACGGCCA GTATCTGGAG TTTGTCGAAG ACGGCGGTTA CGACCATCCG CAATGGTGGT CGGCCGCGGG CATGGAATGG CTGATGATGC AGGAGCGCTC GGCGCCGCTC GGCTGGCGTC GCGATCCGGC CTCGCGCACG TGGCAGGTGG TGCGGTATGG CCAGCCGCGC ACGCTCAATC GCGACGAGCC GGCGCGCCAC GTCAGCCTGT ACGAGGCGCA GGCGTGGTGC CGCTGGGCCG GCCGCCGCCT GCCGACCGAA GACGAATGGG AGATGGCCGC CGTGCTTGGC CGCGCGGGCT TCCACTGGGG GCAGGTGTGG GAGTGGACGT CGTCGCCATT CGAGCCGTAC CCCGATTTCG TGCCGGGTGC GCCGCGCGGG CGGGTGGCGA CGCTGTCCGC GCCGCATTTC ATGACCATGC AGACGGTGCG GGGCGCGGCA GCGCATACGC CGCAGCGGGT GCGGCATCCG CGCTTCCGCG GTTTCCTGCT GCCGGAGCGG GATGATGTCT TTGTCGGCTT CCGCACCTGC GCCCTGTAA
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Protein sequence | MAEFFMLPDP TFIGALSDWN DGRRLPRQGI AHSLVDARNR TLALLAAFGD TQRGWQIERV LHHAPPLWTL GQLAWFAEFW CLREPRRVGE DAVEDGGGTE WALPRWQATL PAGLDGADSF FDMDRMPPDA CWALTLPGIA TIKQYAHDVL DRVLRKLATL GTDEDAALEP FRWAVFHEDL RAEHLHGLLQ VLGLQPAGQP PLAAVVVPAA RTLSLPGGRF QMGWPDADGF VFDNECPPHR TYVPAFEIDA QPVTNGQYLE FVEDGGYDHP QWWSAAGMEW LMMQERSAPL GWRRDPASRT WQVVRYGQPR TLNRDEPARH VSLYEAQAWC RWAGRRLPTE DEWEMAAVLG RAGFHWGQVW EWTSSPFEPY PDFVPGAPRG RVATLSAPHF MTMQTVRGAA AHTPQRVRHP RFRGFLLPER DDVFVGFRTC AL
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