| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0935 |
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| Symbol | trmD |
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| ID | 1219743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 985211 |
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| End bp | 985999 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637237297 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | NP_519056 |
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| Protein GI | 17545654 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0285774 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTTCG ATGTCATCTC GCTGTTCCCG GAGATGTTCC GGGCGTTGAC CGACTGGGGG
ATCACCAGCC GGGCAGCCAA GCAGCAGGTG TACACGTTGC GTACCTGGAA CCCGCGCGAC
TTCACGACGG ACAATTACCG TACCGTGGAT GACCGGCCCT ATGGCGGCGG CCCAGGCATG
GTGATGCTGG CCAAGCCGCT GGAAGCGGCG CTCGATGCGA TCCGCGAGGC GCAGGCGCCC
GCGCCGTCGC ATGTGGTGCT GCTGTCGCCG CAAGGCCGGC CGCTGACCCA CCGGCGGGTG
ATGGAGCTGG CGCAGCTGCC GGCGCTGACG CTGCTGTGCG GCCGCTACGA GGCCATCGAC
CAGCGTCTGG TCGACCGGCG CGTCGATGAA GAAATTAGCC TCGGCGATTT CGTGCTGTCC
GGCGGTGAGA TCGCCGCCAT GGCTATCATC GACGCCGTGG TGCGGCAGTT GCCCGGGGTG
CTGGGCGATG CGCAGTCGGC GGTGCAGGAC AGTTTCGTCA ACGGCCTGCT GGATTGCCCG
CATTACACGC GGCCGGAAGA ATACGAAGGC GTGCGTGTGC CCGATGTGCT GCTGGGCGGC
CACCACGCCG AGATCGAGAA GTGGCGCCGC CAGCAGGCGC TGTTGAATAC GATGCGCAAG
CGGCCCGATC TGATCGAGGC GGCGCGCAGG CAGGGTTTGT TGTCCCGCAG CGATGAGGTC
TTCCTCGCTG CCGCGGCGAC GACGGCAAAG GGGTCGGGCG CTTCCCTATC GGAAGCCCCG
GCCAAGTGA
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| Protein sequence | MQFDVISLFP EMFRALTDWG ITSRAAKQQV YTLRTWNPRD FTTDNYRTVD DRPYGGGPGM
VMLAKPLEAA LDAIREAQAP APSHVVLLSP QGRPLTHRRV MELAQLPALT LLCGRYEAID
QRLVDRRVDE EISLGDFVLS GGEIAAMAII DAVVRQLPGV LGDAQSAVQD SFVNGLLDCP
HYTRPEEYEG VRVPDVLLGG HHAEIEKWRR QQALLNTMRK RPDLIEAARR QGLLSRSDEV
FLAAAATTAK GSGASLSEAP AK
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