Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0914 |
Symbol | rfaE |
ID | 1219722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 965989 |
End bp | 966948 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637237276 |
Product | ADP-heptose synthase protein |
Protein accession | NP_519035 |
Protein GI | 17545633 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
TIGRFAM ID | [TIGR02198] rfaE bifunctional protein, domain I |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCCGCAG CCATGACCAA GACCACGCTC GCTTCCGAAC AGATCCATGC CGCTCGCATC CTCGTGGTGG GCGACATGAT GCTCGACCGC TACTGGTTCG GCGATGTCGA ACGGATTTCG CCCGAAGCCC CGGTGCCGGT GGTGCAGATC AAGCGCTCGG ACGAACGGCT AGGCGGCGCC GCCAACGTGG CGCGCAACGT GGCCGCGCTG GGGGCGCAGG CTGGCATGCT GGGCGTGATC GGCGAGGATG AGCCGGGCCG CACCATCGAG GCGCTGCTCG ACGCCAGCCA TGTCCGCGGC CATCTGCACC GCGATCCGAG CGTCAACACC ACCATCAAGC TGCGCGTGCT GGCACGCCAG CAGCAGCTGA TCCGCGTCGA TTTCGAGAAT CCGCCGACGC ACGAAGTGCT GATATCGGTG CTGGACCGCT TCGGCACGCT GCTGCCCGAG CACGACGTGG TGGTGCTGTC CGACTACGGC AAGGGCGGGC TCACGCACGT CGCCAAGATG ATCGAGGCGG CGCGCCAGGC CGGCCGCCGC GTGCTGGTCG ATCCGAAGGG CGACGACTAC TCGCGCTACA AGGGCGCGAC CATGATCACG CCCAACCGCG CCGAGATGCG GCAGGTGGTC GGCAGCTGGA AGACCGAGGC CGACCTGACC ATCCGCGCGC AGAACCTGCG CCGCGAACTG CAGCTCGAGG CGCTGCTGCT GACGCGCTCG GAAGAGGGCA TGACGCTCTA CACCGAGCAT GAGGTGCTGC ATGTGTCGGC CCAGGCGCGC GAGGTGTACG ACGTGTCCGG CGCAGGCGAC ACCGTCATCG CCACGCTGGC GACGCTGCTG GGCGCCGGCG CCAACATCAA GGAAGCCGTG CAGTACGCCA ACCGTGCGGG CGGCATCGTG GTCGGCAAGC TGGGTACCGC CGTCGTCACC TACGCAGAAC TCTTCAATCA AGCATCATGA
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Protein sequence | MPAAMTKTTL ASEQIHAARI LVVGDMMLDR YWFGDVERIS PEAPVPVVQI KRSDERLGGA ANVARNVAAL GAQAGMLGVI GEDEPGRTIE ALLDASHVRG HLHRDPSVNT TIKLRVLARQ QQLIRVDFEN PPTHEVLISV LDRFGTLLPE HDVVVLSDYG KGGLTHVAKM IEAARQAGRR VLVDPKGDDY SRYKGATMIT PNRAEMRQVV GSWKTEADLT IRAQNLRREL QLEALLLTRS EEGMTLYTEH EVLHVSAQAR EVYDVSGAGD TVIATLATLL GAGANIKEAV QYANRAGGIV VGKLGTAVVT YAELFNQAS
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