Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0901 |
Symbol | gyrA |
ID | 1219709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 950444 |
End bp | 953101 |
Gene Length | 2658 bp |
Protein Length | 885 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637237263 |
Product | DNA gyrase subunit A |
Protein accession | NP_519022 |
Protein GI | 17545620 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.018045 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.748507 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCAAT TCGCCAAAGA GACACTCCCG GTATCGCTCG AAGAAGAAAT GCGCAGTTCA TACCTCGCTT ACGCCATGAG CGTAATCGTG GGCCGCGCGC TTCCGGACGT GCGGGATGGT CTCAAGCCGG TGCATCGCCG CGTGCTGTAC GCGATGCACG AGCTGAACAA CGACTGGAAC CGTCCCTACA AGAAGTCGGC ACGTATCGTC GGTGACGTGA TCGGTAAGTA CCACCCGCAC GGCGACTCCG CGGTCTATGA CACCATCGTG CGGATGGCAC AGGATTTCTC GCTGCGCTAC ATGCTGGTCG ACGGCCAGGG CAACTTCGGC TCGGTCGACG GCGACAACGC GGCGGCGATG CGTTACACGG AAATCCGCCT GTCGAAGATC GCCCACGAGC TGCTGGCCGA CATCGACAAG GAAACCGTCG ATTTCGAGCC GAACTACGAC GGCAGCGAAA CCGAGCCGTC CATCCTGCCC GCGCGCATTC CGAACTTGCT GATCAACGGC TCGTCCGGGA TCGCGGTCGG CATGGCGACC AACATCCCGC CGCACAACCT AAGGGAGGTG GTGGACGGCT GTCTGCACCT GCTGCGCAAC CCGGATGCGA CGGTCGACGA ACTGATCGAG CTGATCCCGG CGCCGGATTT CCCGACCGCC GGCATCATCT ACGGCATCTC GGGCGTGCGC GAGGGCTATC GCACCGGCCG TGGCCGCGTG GTGATGCGTG CCAAGACGCA CTTCGAGGAT ATCGACCGCG GTCAGCGCCA GGCGATCATC GTCGATGAGC TGCCCTATCA AGTTAACAAG CGCACGCTGC TCGAGCGGAT CGCCGAACTG GTGACCGAAA AGCGCATCGA GGGCATTTCC GATATCCGCG ACGAGTCCGA CAAGTCGGGC ATGCGCGTGG TGATCGAGCT CAAGCGTGGC GAAGTGCCGG AGGTCGTGCT CAACAACCTC TATAAGAATA CGCAGTTGCA GGACACGTTC GGCATGAACA TGGTGGCGCT GGTCGACGGC CAGCCCCGCC TGCTGAACCT GCGCCAGATG CTGGAGTGCT TCCTGCTGCA CCGCCGCGAG GTGGTGACGC GTCGCACGGT GTTCGATCTG CGCAAGGCGC GCGAGCGGGG GCACATCCTC GAGGGGCTGG CCGTGGCGCT GGCCAATATC GACGAGTTCA TCGCCATCAT CAAGGCTGCG CCGACACCTC CGATCGCCAA GCAGGAACTG ATGGGTCGCA ACTGGGATTC GGGCCTGGTG CGCGAGATGC TGTCGCGGGC CGAGAGCGAC ACCGTCGGCG GCCGTGCCGC CTATCGTCCG GAAGGGCTGC TGCCCGTTTT CGGCATGCAG GAGGGGGGGC TCTACAAGCT GTCCGACACG CAGGCCCAGG AAATCCTGCA GATGCGCCTG CAACGCCTCA CGGGGCTGGA GCAGGACAAG ATCGTCCAGG AATACCGCGA AGTGATGGCG CAGATTGCCG ACCTGCTGGA CATCCTGGCG CGCCCGGAGC GCATTACTGC GATCATCGTC GAGGAACTCA CGCTGATTCG CGCGGAATTC GGCGACGAGC GTCGCTCGCA GATCGAGCAT AATGCGACCG AGTTGGACAC CGAAGACCTC ATTACGCCGC AGGATCTGGT GGTGACGCTG TCCCACAGCG GCTATATGAA GAGCCAGCCG ATCTCCGAAT ACCGCGCGCA GAAGCGTGGC GGGCGCGGCA AGCAAGCCGC CGCCACCAAG GAAGATGACT GGATCGACAC GCTATTTGTC GCCAACACGC ACGATTACAT CCTCTGCTTC TCCAATCGCG GCCGTCTCTA CTGGCTCAAG GTGTGGGAGG TGCCGCAAGG CAGCCGCAAT TCGCGCGGGC GCCCGATCGT CAACATGTTC CCGCTGTCGC CCGGCGAGAA GATCAATGTG ATCTTGCCGG TCAAGCAGTT CGATGAGCAG CACTTCGTCT TCATGGCCAC TTCCAAGGGC ACGGTCAAGA AAACGGCGCT CACCGAATTC TCCAACCCGC GCAAGGCCGG CATCATCGCC GTGGACCTCG ATGACGGCGA TTTCCTGATC GGCGCGGATA TCACCGATGG CCAGCATGAT GTGATGCTGT TCTCGGACGC CGGCAAGGCG GTCCGCTTTG ACGAGAACGA TGTCCGCCCG ATGGGCCGTC AGGCGCGCGG GGTGCGGGGC ATGAACCTGG AGGAAGGCCA GCAGGTGATC GCCATGCTGG TGGCGCCGGC CGAAACGGCG GGCGAAGGCG AGCAGGCGGT GGCGGGCAGT GTGCTGACCG CTACCGAGAA CGGCTACGGC AAGCGCACGC CGATCTCCGA GTACACCCGC CATGGCCGCG GCACCAAGGG CATGATCGCG ATCCAGACCT CCGAGCGCAA CGGCAAGGTG GTCGCGGCCG CGCTGGTGGC GCCCGAGGAC GAGATCATGC TGATCACGAC CGGCGGTGTG CTGATCCGTA CCCGCGTGGA TGAGATCCGC GAGATGGGGC GCGCCACCCA GGGCGTCACG CTGATTGCTG TGGGCGAGGG TAACAAATTG TCCGGGCTGC AACGTGTGGT GGAGTCGGAT GCCGAGGGCG AAGATGCCGC CGATGGCGGG CCGGAATCCG ATGGCGAAGC GCCGGACGCG GATACCGCCG AAACATAA
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Protein sequence | MDQFAKETLP VSLEEEMRSS YLAYAMSVIV GRALPDVRDG LKPVHRRVLY AMHELNNDWN RPYKKSARIV GDVIGKYHPH GDSAVYDTIV RMAQDFSLRY MLVDGQGNFG SVDGDNAAAM RYTEIRLSKI AHELLADIDK ETVDFEPNYD GSETEPSILP ARIPNLLING SSGIAVGMAT NIPPHNLREV VDGCLHLLRN PDATVDELIE LIPAPDFPTA GIIYGISGVR EGYRTGRGRV VMRAKTHFED IDRGQRQAII VDELPYQVNK RTLLERIAEL VTEKRIEGIS DIRDESDKSG MRVVIELKRG EVPEVVLNNL YKNTQLQDTF GMNMVALVDG QPRLLNLRQM LECFLLHRRE VVTRRTVFDL RKARERGHIL EGLAVALANI DEFIAIIKAA PTPPIAKQEL MGRNWDSGLV REMLSRAESD TVGGRAAYRP EGLLPVFGMQ EGGLYKLSDT QAQEILQMRL QRLTGLEQDK IVQEYREVMA QIADLLDILA RPERITAIIV EELTLIRAEF GDERRSQIEH NATELDTEDL ITPQDLVVTL SHSGYMKSQP ISEYRAQKRG GRGKQAAATK EDDWIDTLFV ANTHDYILCF SNRGRLYWLK VWEVPQGSRN SRGRPIVNMF PLSPGEKINV ILPVKQFDEQ HFVFMATSKG TVKKTALTEF SNPRKAGIIA VDLDDGDFLI GADITDGQHD VMLFSDAGKA VRFDENDVRP MGRQARGVRG MNLEEGQQVI AMLVAPAETA GEGEQAVAGS VLTATENGYG KRTPISEYTR HGRGTKGMIA IQTSERNGKV VAAALVAPED EIMLITTGGV LIRTRVDEIR EMGRATQGVT LIAVGEGNKL SGLQRVVESD AEGEDAADGG PESDGEAPDA DTAET
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