Gene RSc0901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0901 
SymbolgyrA 
ID1219709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp950444 
End bp953101 
Gene Length2658 bp 
Protein Length885 aa 
Translation table11 
GC content64% 
IMG OID637237263 
ProductDNA gyrase subunit A 
Protein accessionNP_519022 
Protein GI17545620 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.018045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.748507 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAAT TCGCCAAAGA GACACTCCCG GTATCGCTCG AAGAAGAAAT GCGCAGTTCA 
TACCTCGCTT ACGCCATGAG CGTAATCGTG GGCCGCGCGC TTCCGGACGT GCGGGATGGT
CTCAAGCCGG TGCATCGCCG CGTGCTGTAC GCGATGCACG AGCTGAACAA CGACTGGAAC
CGTCCCTACA AGAAGTCGGC ACGTATCGTC GGTGACGTGA TCGGTAAGTA CCACCCGCAC
GGCGACTCCG CGGTCTATGA CACCATCGTG CGGATGGCAC AGGATTTCTC GCTGCGCTAC
ATGCTGGTCG ACGGCCAGGG CAACTTCGGC TCGGTCGACG GCGACAACGC GGCGGCGATG
CGTTACACGG AAATCCGCCT GTCGAAGATC GCCCACGAGC TGCTGGCCGA CATCGACAAG
GAAACCGTCG ATTTCGAGCC GAACTACGAC GGCAGCGAAA CCGAGCCGTC CATCCTGCCC
GCGCGCATTC CGAACTTGCT GATCAACGGC TCGTCCGGGA TCGCGGTCGG CATGGCGACC
AACATCCCGC CGCACAACCT AAGGGAGGTG GTGGACGGCT GTCTGCACCT GCTGCGCAAC
CCGGATGCGA CGGTCGACGA ACTGATCGAG CTGATCCCGG CGCCGGATTT CCCGACCGCC
GGCATCATCT ACGGCATCTC GGGCGTGCGC GAGGGCTATC GCACCGGCCG TGGCCGCGTG
GTGATGCGTG CCAAGACGCA CTTCGAGGAT ATCGACCGCG GTCAGCGCCA GGCGATCATC
GTCGATGAGC TGCCCTATCA AGTTAACAAG CGCACGCTGC TCGAGCGGAT CGCCGAACTG
GTGACCGAAA AGCGCATCGA GGGCATTTCC GATATCCGCG ACGAGTCCGA CAAGTCGGGC
ATGCGCGTGG TGATCGAGCT CAAGCGTGGC GAAGTGCCGG AGGTCGTGCT CAACAACCTC
TATAAGAATA CGCAGTTGCA GGACACGTTC GGCATGAACA TGGTGGCGCT GGTCGACGGC
CAGCCCCGCC TGCTGAACCT GCGCCAGATG CTGGAGTGCT TCCTGCTGCA CCGCCGCGAG
GTGGTGACGC GTCGCACGGT GTTCGATCTG CGCAAGGCGC GCGAGCGGGG GCACATCCTC
GAGGGGCTGG CCGTGGCGCT GGCCAATATC GACGAGTTCA TCGCCATCAT CAAGGCTGCG
CCGACACCTC CGATCGCCAA GCAGGAACTG ATGGGTCGCA ACTGGGATTC GGGCCTGGTG
CGCGAGATGC TGTCGCGGGC CGAGAGCGAC ACCGTCGGCG GCCGTGCCGC CTATCGTCCG
GAAGGGCTGC TGCCCGTTTT CGGCATGCAG GAGGGGGGGC TCTACAAGCT GTCCGACACG
CAGGCCCAGG AAATCCTGCA GATGCGCCTG CAACGCCTCA CGGGGCTGGA GCAGGACAAG
ATCGTCCAGG AATACCGCGA AGTGATGGCG CAGATTGCCG ACCTGCTGGA CATCCTGGCG
CGCCCGGAGC GCATTACTGC GATCATCGTC GAGGAACTCA CGCTGATTCG CGCGGAATTC
GGCGACGAGC GTCGCTCGCA GATCGAGCAT AATGCGACCG AGTTGGACAC CGAAGACCTC
ATTACGCCGC AGGATCTGGT GGTGACGCTG TCCCACAGCG GCTATATGAA GAGCCAGCCG
ATCTCCGAAT ACCGCGCGCA GAAGCGTGGC GGGCGCGGCA AGCAAGCCGC CGCCACCAAG
GAAGATGACT GGATCGACAC GCTATTTGTC GCCAACACGC ACGATTACAT CCTCTGCTTC
TCCAATCGCG GCCGTCTCTA CTGGCTCAAG GTGTGGGAGG TGCCGCAAGG CAGCCGCAAT
TCGCGCGGGC GCCCGATCGT CAACATGTTC CCGCTGTCGC CCGGCGAGAA GATCAATGTG
ATCTTGCCGG TCAAGCAGTT CGATGAGCAG CACTTCGTCT TCATGGCCAC TTCCAAGGGC
ACGGTCAAGA AAACGGCGCT CACCGAATTC TCCAACCCGC GCAAGGCCGG CATCATCGCC
GTGGACCTCG ATGACGGCGA TTTCCTGATC GGCGCGGATA TCACCGATGG CCAGCATGAT
GTGATGCTGT TCTCGGACGC CGGCAAGGCG GTCCGCTTTG ACGAGAACGA TGTCCGCCCG
ATGGGCCGTC AGGCGCGCGG GGTGCGGGGC ATGAACCTGG AGGAAGGCCA GCAGGTGATC
GCCATGCTGG TGGCGCCGGC CGAAACGGCG GGCGAAGGCG AGCAGGCGGT GGCGGGCAGT
GTGCTGACCG CTACCGAGAA CGGCTACGGC AAGCGCACGC CGATCTCCGA GTACACCCGC
CATGGCCGCG GCACCAAGGG CATGATCGCG ATCCAGACCT CCGAGCGCAA CGGCAAGGTG
GTCGCGGCCG CGCTGGTGGC GCCCGAGGAC GAGATCATGC TGATCACGAC CGGCGGTGTG
CTGATCCGTA CCCGCGTGGA TGAGATCCGC GAGATGGGGC GCGCCACCCA GGGCGTCACG
CTGATTGCTG TGGGCGAGGG TAACAAATTG TCCGGGCTGC AACGTGTGGT GGAGTCGGAT
GCCGAGGGCG AAGATGCCGC CGATGGCGGG CCGGAATCCG ATGGCGAAGC GCCGGACGCG
GATACCGCCG AAACATAA
 
Protein sequence
MDQFAKETLP VSLEEEMRSS YLAYAMSVIV GRALPDVRDG LKPVHRRVLY AMHELNNDWN 
RPYKKSARIV GDVIGKYHPH GDSAVYDTIV RMAQDFSLRY MLVDGQGNFG SVDGDNAAAM
RYTEIRLSKI AHELLADIDK ETVDFEPNYD GSETEPSILP ARIPNLLING SSGIAVGMAT
NIPPHNLREV VDGCLHLLRN PDATVDELIE LIPAPDFPTA GIIYGISGVR EGYRTGRGRV
VMRAKTHFED IDRGQRQAII VDELPYQVNK RTLLERIAEL VTEKRIEGIS DIRDESDKSG
MRVVIELKRG EVPEVVLNNL YKNTQLQDTF GMNMVALVDG QPRLLNLRQM LECFLLHRRE
VVTRRTVFDL RKARERGHIL EGLAVALANI DEFIAIIKAA PTPPIAKQEL MGRNWDSGLV
REMLSRAESD TVGGRAAYRP EGLLPVFGMQ EGGLYKLSDT QAQEILQMRL QRLTGLEQDK
IVQEYREVMA QIADLLDILA RPERITAIIV EELTLIRAEF GDERRSQIEH NATELDTEDL
ITPQDLVVTL SHSGYMKSQP ISEYRAQKRG GRGKQAAATK EDDWIDTLFV ANTHDYILCF
SNRGRLYWLK VWEVPQGSRN SRGRPIVNMF PLSPGEKINV ILPVKQFDEQ HFVFMATSKG
TVKKTALTEF SNPRKAGIIA VDLDDGDFLI GADITDGQHD VMLFSDAGKA VRFDENDVRP
MGRQARGVRG MNLEEGQQVI AMLVAPAETA GEGEQAVAGS VLTATENGYG KRTPISEYTR
HGRGTKGMIA IQTSERNGKV VAAALVAPED EIMLITTGGV LIRTRVDEIR EMGRATQGVT
LIAVGEGNKL SGLQRVVESD AEGEDAADGG PESDGEAPDA DTAET