Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0820 |
Symbol | |
ID | 1219628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 862903 |
End bp | 863580 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637237182 |
Product | putative transcription regulator protein |
Protein accession | NP_518941 |
Protein GI | 17545539 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGACAG CCCGTACACC CGTCAAACCC AGGAAACTTC CCACACAGGA GCGTTCGCGG GCCACCGTGG ACGCCATAAT GCAAGCAGCA ACTTACATTC TGGTGAAGTT CGGGTGGGAA CGCCTGACAA CCAACGCGAT CGCGGAGCGT GCCGGCGTGA ACATCGGCTC GCTCTATCAA TACTTTCCGA ACAAGCAGGC GATCATTGCC GAACTGCAGC GGCGCCATGT CCTTCAGACA CGCGAGATAC TGTCAAAGGC GCTTCCGCAA GTCTCCGAGC AGCGCTCGCT GCGCGAGGCG CTGACCCTGC TTGTCGTCGC GATGATTGAT GAGCATCGCG TTGCGCCCGC GGTTCATCGA GCGATCGATG CGGAGTTGCC GCGATCGGTA AGGGTTCCGC TGGGTGACGA GAGTCGCGGC GGCGACCAGC CTTTGCAAGT GCTGCAACCC TTCATGAAGA ACGTGCCCGA TCCCCACTTT GCGCTCCGGA TCGCACGCAT CGCGGCGCAC GCCGTCATCC ACGAAGCGGC CTCGCATCAG CCTGAACTGT TCGATCGCCC CGATTTCGTC GATGAGGTCG TTGCGCTTTT GGAGGGGTAC TTCCGACGCC CAGCGGCAAG ATCTGCCGTT GAAATCGGGC GCGTGCCCGT GAAGAAGGCA ACCCGCTCGA AGCGTTGA
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Protein sequence | MKTARTPVKP RKLPTQERSR ATVDAIMQAA TYILVKFGWE RLTTNAIAER AGVNIGSLYQ YFPNKQAIIA ELQRRHVLQT REILSKALPQ VSEQRSLREA LTLLVVAMID EHRVAPAVHR AIDAELPRSV RVPLGDESRG GDQPLQVLQP FMKNVPDPHF ALRIARIAAH AVIHEAASHQ PELFDRPDFV DEVVALLEGY FRRPAARSAV EIGRVPVKKA TRSKR
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