Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0782 |
Symbol | |
ID | 1219589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 827078 |
End bp | 827824 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637237143 |
Product | hypothetical protein |
Protein accession | NP_518903 |
Protein GI | 17545501 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3703] Uncharacterized protein involved in cation transport |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.498186 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.106018 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGTCA CCCGAGAGGA CCTCGAACAG AACCGGTTGC GCGCCGCCCT GGGTGATTCA CCCGTCGCGT CGACGCTGCT GACCGAGGCT GCGCTGGAAG CGTCGCTCGC ATCGACGCTC GCACGGCTGT CGGCGGCGCC CTGCGAGGGG CAGGACGCCT GGGTGTTCGG CTACGGCTCC CTGATCTGGA ACCCGATGAT CTTCCACACC GAGGTCGCGC GCGCCACGGT GCGCGGCTAT CACCGGGGCT TCTACCTGTA TTCCCGCATC AACCGGGGCA CCTGGGACAA TCCCGGCCTG GTGCTCGGCC TCGACCGCGG CGGCAGTTGC AGCGGCGTGG CCTTCCGCGT GCCGCGCGCG CATGCCGAAC GCGAATTCCG CGTGCTGTGG CGCCGCGAGA TGCTGACCGG CGCCTACCTG CCGCGCTGGC TGCCGACGGA AATCCACGGC GAGCGCATCC TCGCGCTGGC CTTCGTGATG AACCGTACCC ATGAAGCCTA TGCCGGCCGC CTGCCCGACG AGCGCGTGGT CGGCTGCCTG CACAAGGCCG TCGGACTGTA CGGCCCGGCC CGCGAATACC TGCAGCGCAC GCTGATCGGC CTGGCCAGCA ACGGGCTGCA CGATCCGTAC CTCGACCGGC TCTGGCAGCG GCTGCAGGCC ATGGACATAA ACGCGGCCAA CGCGCCATCG CAGACCGCGG ATACCGACGG CACGGGCCCG TTGCCCGATC CCTATCTCAG CGCCTGA
|
Protein sequence | MAVTREDLEQ NRLRAALGDS PVASTLLTEA ALEASLASTL ARLSAAPCEG QDAWVFGYGS LIWNPMIFHT EVARATVRGY HRGFYLYSRI NRGTWDNPGL VLGLDRGGSC SGVAFRVPRA HAEREFRVLW RREMLTGAYL PRWLPTEIHG ERILALAFVM NRTHEAYAGR LPDERVVGCL HKAVGLYGPA REYLQRTLIG LASNGLHDPY LDRLWQRLQA MDINAANAPS QTADTDGTGP LPDPYLSA
|
| |