| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0781 |
|---|
| Symbol | |
|---|
| ID | 1219588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 826280 |
|---|
| End bp | 827065 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637237142 |
|---|
| Product | aankyrin repeat-containing protein |
|---|
| Protein accession | NP_518902 |
|---|
| Protein GI | 17545500 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0666] FOG: Ankyrin repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.150495 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0323069 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCTCG CCCCGCACCC CGCGCTCAAC CAGGTCCTCG GCATCATGCT GGGCATCGCG
CTGGCACTGG GCGACATGGC GAGCGCCTGG CAGGAGCGGC ACCTGCCGTC GGTGCGGGCG
ACCACGCCGG CCAAGGTCGT CCCGGCCGGC AGCGGGCCCG ACGCCCGCGC CGCCCGCCGC
GCCGACTCCG CCACGCGCGA CCACGACCTG ATCGTCGCCG CGCAGACCGG CAACACGATG
GCCATCCAGT CCCTGCTGGC CGACGGCGCC AGCCTCAGGG CGCGCGATGC CGAAGGCCGC
ACGGCCCTGA TCGCGGCGCT CTATGCCCAC ATGGGCGCGG CGGCCCGCCT GCTGATCCAG
GCCGGCGCCG ACGTCAATCT GCAGGACAAC GCCCAGAGCA GCGCCTTCCT GCTGGCGGCC
ACCCAGGGCG ATGCGGAGAC CGTGCGGCTG GCGCTGTCGC ACGGCGCCAA CCTGCGCGCC
ACCAATGCCG ACGGCGACAC CGCGCTGATC CCGGCCGCGC GGCGCGGCTA CGTGGAAGTG
GTGAACGAGC TGGTCAAGGC GGGCGTGCCG GTCAACGCCA CCAACAACCT GGGCCTGACC
GCGCTCATCG AAGCCGTGGC ACTGGGCGAC GGCAGCGACA AATACGAGAA GACCGTGCAG
CTGCTGCTCG ACGGCGGCGC CGATCCCAAC CTGCCCGACC GCGGCGGCAT CACGCCGATG
CGCCATGCGC GGCAGCGCGG CTTCCACGGC ATCGGCGCGC TACTGTTCAA GGCGCGCGGC
CACTGA
|
|---|
| Protein sequence | MLLAPHPALN QVLGIMLGIA LALGDMASAW QERHLPSVRA TTPAKVVPAG SGPDARAARR
ADSATRDHDL IVAAQTGNTM AIQSLLADGA SLRARDAEGR TALIAALYAH MGAAARLLIQ
AGADVNLQDN AQSSAFLLAA TQGDAETVRL ALSHGANLRA TNADGDTALI PAARRGYVEV
VNELVKAGVP VNATNNLGLT ALIEAVALGD GSDKYEKTVQ LLLDGGADPN LPDRGGITPM
RHARQRGFHG IGALLFKARG H
|
|---|
| |