Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0779 |
Symbol | |
ID | 1219586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 823489 |
End bp | 824331 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637237140 |
Product | putative thioredoxin protein |
Protein accession | NP_518900 |
Protein GI | 17545498 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.297357 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00262303 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGCGACG TCACCTCACA GAATTTCGCA CAGGAAGTGA TCGAAACCTC TCGCCAAGTC CCGGTGCTGG TCGATTTCTG GGCGCCATGG TGCGGCCCCT GCCGGACCCT CGGCCCGATG CTGGAAAAGC TGGAGCACGA ATACGCCGGC AAGTGGAAGC TCGCCAAGGT CAATTCGGAC GAGAGCCCCG AACTGTCGGC GCACTTCAAC GTGCGCAGCA TTCCCCACGT GGTGGCCTTC GTGGACGGCA AGCCGGTCGA CCAGTTCGTC GGCGTGCTGC CGGAATCGCA GCTGCGCGGG TTCCTCGACC GCGTGATCCC GCAGCCGGCC GAAGTAGCCT ACCGCGAGGG CCTGGCCGCG CACCAGGCGA ACGCGCTCGC GCACGCGCGC GAAGCCTTCC AGAATGCGCT CGCCTACGAC CCCGGCTTCG ATGCGGCCCG GTTCGCGCTG ATCGACCTGC TGCTCGACAC CGGCGATGTC CGTGCCGCGC AGAATGAATT CGCGCTGCTG TCGTCCAGGG CCCCGCAAGA CGAGCGCCAT GCGCCGCTGC AGACCCGCCT CGAGGCCGCC GAGCACGCCG GCGCCCTGCC CGATGCCGAT GCGCTGCACC GGCGCATCGC CGCCGCGCCG GACGACCTGC AGGCCCGCCT GGACCTGGCG CAGCAGTACA TCGCCCGCCA GGACTACGAG GCCGCGCTCG AACAGCTGCT CGCCATCGTC GAGCGCGACC GCGCGTTCCG CGATGACATC GGCCGCAAGA CCATGGTCTC GGTATTCGAT CTGATGCGCG ACCCGCAGGC GGTCTCGCTC TGGCGCCGTC AGTTGGCGTC CAGGTTGAAC TGA
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Protein sequence | MSDVTSQNFA QEVIETSRQV PVLVDFWAPW CGPCRTLGPM LEKLEHEYAG KWKLAKVNSD ESPELSAHFN VRSIPHVVAF VDGKPVDQFV GVLPESQLRG FLDRVIPQPA EVAYREGLAA HQANALAHAR EAFQNALAYD PGFDAARFAL IDLLLDTGDV RAAQNEFALL SSRAPQDERH APLQTRLEAA EHAGALPDAD ALHRRIAAAP DDLQARLDLA QQYIARQDYE AALEQLLAIV ERDRAFRDDI GRKTMVSVFD LMRDPQAVSL WRRQLASRLN
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