Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0739 |
Symbol | |
ID | 1219545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 785213 |
End bp | 786328 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637237099 |
Product | hypothetical protein |
Protein accession | NP_518860 |
Protein GI | 17545458 |
COG category | [R] General function prediction only |
COG ID | [COG2391] Predicted transporter component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.359729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGACA TTGATCTTCA CGCGCTGTCC CGCACCGTGC TGTGGGCGAC GTTCGCCCTG ACGTTTCTGT TCGGCGCGAT CCTGCAGCGC ACGCATTTCT GCACGATGGG CGCGGTGTCC GACGCGGTCA ACATCGGCGA TTGGAGCCGG CTGCGGATGT GGGCGCTGGC TATCGGCGTG GCGATGATCG GCACGGGCAT CCTCGGCTGG GCGGGGTGGA TCGATCCGGC CAAGACGATC TATGCGGCCG GCCGGCTGCA GTGGCTGTCG GCGCTGGTCG GCGGGCTGAT GTTCGGCTTC GGCATGGTGC TGGGCTCGGG GTGCGGCAGC AAGACGCTGG TGCGCATCGG CGGGGGCAAT CTGAAGTCGG TGGTGGTGTT CGTGTTCCTC GGGCTGTCGG CGTACATGAC GCTCAAGGGC GTGTTCGGCG TGGTGCGCGT CGCGACCGTC GATGCCGTGG CGATCGCGCT GCCGACGACG CAGGATCTGC CGAGCGTGCT GGGGCATGCG CTGTCGGCGG ACGTGCGCAT GTTGCGCCTG GCGCTCGCAC TGGCGATCGG CGGGGCGCTG GCGGTGTGGG CGCTCGCCGG CCGCGATTTC CGTACGCCGG ACAATCTGCT GGGCGGCATC GGCGTCGGGC TCGTCATCGT GGCCATGTGG TATGTGTCCG GCCATCTCGG CTATGTCGCG GAAGATCCGG ACACGCTGCA GGAGGCCTTC GTCGCGACCA ACAGCGGCCG GATGGAGGCG CTGAGCTTCG TGGCGCCCGT GTCGTATACG CTGGAATGGC TGATGTTCTT CAGCGATACG TCCAAGGTGC TGACGGTCGG CATCGTCAGC GTGCTTGGCG TGATCGCCGG CTCGGCCGCG GTGGCGCTGG CCAGCGGCAC GTTCCGCTGG GAGGGCTTCG CCAATGCGGA GGACACCGGC AACCATATCG TGGGCGGTAT CCTGATGGGC GCGGGCGGCG TGACGGCGCT GGGCTGCACG ATCGGGCAGG GGCTGTCGGG CGTGTCGACG CTGGCGATCG GTTCGTTCGT CGCGTTGGCG GGTATCCTGG CGGGCGCGGT GCTGGCGTTC CGCTACCAGA TGTGGCGGCT GGAGCGTGGT GGTTAG
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Protein sequence | MPDIDLHALS RTVLWATFAL TFLFGAILQR THFCTMGAVS DAVNIGDWSR LRMWALAIGV AMIGTGILGW AGWIDPAKTI YAAGRLQWLS ALVGGLMFGF GMVLGSGCGS KTLVRIGGGN LKSVVVFVFL GLSAYMTLKG VFGVVRVATV DAVAIALPTT QDLPSVLGHA LSADVRMLRL ALALAIGGAL AVWALAGRDF RTPDNLLGGI GVGLVIVAMW YVSGHLGYVA EDPDTLQEAF VATNSGRMEA LSFVAPVSYT LEWLMFFSDT SKVLTVGIVS VLGVIAGSAA VALASGTFRW EGFANAEDTG NHIVGGILMG AGGVTALGCT IGQGLSGVST LAIGSFVALA GILAGAVLAF RYQMWRLERG G
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