Gene RSc0734 details

Gene Information

• Locus tag: RSc0734
• Symbol: tolA
• ID: 1219540
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: +
• Start bp: 780588
• End bp: 781625
• Gene Length: 1038 bp
• Protein Length: 345 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637237094
• Product: TOLA-like transport transmembrane protein
• Protein accession: NP_518855
• Protein GI: 17545453
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3064] Membrane protein involved in colicin uptake
• TIGRFAM ID: [TIGR01352] TonB family C-terminal domain; [TIGR02794] TolA protein

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 0.747648
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCTACGA CGTCGCTGCA TCGTTACGAG CCGGTCCGCG AGCGCGGGAC GCTGCGAGCG 
TTCGCGCTGG CGGTGCTGAC GCACTTGCTG TTGCTGACCT TCCTGTATTT CGGCGTGCAG 
TGGCAGAGCA GCACGCCGCG CGGGGAAGAG GCCGAGTTGT GGGACGAGGC GGCGCTGCAG 
CAGGCAGTGC AGTCTGCGCC GGCGCCCGAG CCGAAGCCGG AACCGGCCGT CCAGGCGCCG 
CCGGCCAAGG TGGAGGAAGA AGCGGACATT GCGCTGGAGC AGCAAAAGCG CAAGCGCGAG 
GAGGAAGCCG CTGCCGCACG CGAGGCCGAA CTGGCGCGCC GCGCGACGGC GGAGCGCGAG 
GACGCCAAGC GCCAGGCCCT GCTCAAAGAG CAGAAGGCGC AGCAGGCCCG GCAAGCGGAA 
CTCCAGAAGC GGGCCCTGGC CGAACAGCTG GCACAGCAGG CCAAGGAGCG GCAGGCCCAC 
GAGAAAGCGG TCGCTGCCGA GGCCCAGGCG CGCAAGGACG CCCAGCTGAA GGCGCAAGCC 
GAGGCCAAGG CCAAAGCCGA GGCGGAAGCC AGGCAGAAGG CCAAGGCCGT AGCGGAAGCC 
AAGGCGAAGG CCGACGCAGA GCAACGGGCT GCGCAAGCCA GGTCCAACGC TCAGCGGCAG 
GCGCGCCTGC GGGATCTGCA AGCGTTGGCG GGCACTGCCG GTGCGACCGG CGCGGCGGCG 
GGCTCGGGCG GCGGCGTCGG CAGCGGGACG GGTGCGGGCG GCACCGCGTC GGCGGGGTAT 
GCCGACCGCG TGCGCGCCAA GGTGCAGCCG AACATCAATT TCTATGACGA CACCTCCGGC 
AACCCCATCG TGACGGTGCT GGTCCAGATG GCGCCCGATG GTACGGTGTT GTCGCGCAGG 
GTCACCAAAC CGAGTGGATA TCCGGTGCTG GACGAAGCCG TGCTGCGCGC GATCGACCTG 
TCCAGTCCGC TGCCCCGCGA TACGAATGGC AAGGCGCCTG CGAGTGTGGT CGTCGGCTTC 
AAGCCCAAGC GGGGCTGA 

 

Protein sequence

MATTSLHRYE PVRERGTLRA FALAVLTHLL LLTFLYFGVQ WQSSTPRGEE AELWDEAALQ 
QAVQSAPAPE PKPEPAVQAP PAKVEEEADI ALEQQKRKRE EEAAAAREAE LARRATAERE 
DAKRQALLKE QKAQQARQAE LQKRALAEQL AQQAKERQAH EKAVAAEAQA RKDAQLKAQA 
EAKAKAEAEA RQKAKAVAEA KAKADAEQRA AQARSNAQRQ ARLRDLQALA GTAGATGAAA 
GSGGGVGSGT GAGGTASAGY ADRVRAKVQP NINFYDDTSG NPIVTVLVQM APDGTVLSRR 
VTKPSGYPVL DEAVLRAIDL SSPLPRDTNG KAPASVVVGF KPKRG