Gene RSc0731 details

Gene Information

• Locus tag: RSc0731
• ID: 1219537
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: +
• Start bp: 779010
• End bp: 779414
• Gene Length: 405 bp
• Protein Length: 134 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637237091
• Product: putative thioesterase protein
• Protein accession: NP_518852
• Protein GI: 17545450
• COG category: [R] General function prediction only
• COG ID: [COG0824] Predicted thioesterase
• TIGRFAM ID: [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family; [TIGR02799] tol-pal system-associated acyl-CoA thioesterase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.942813
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCTTCTT TTGACTGGAA CCTGCGGGTG TATTGGGAAG ATACCGACGC AGGCGGCGTG 
GTGTTCTACG CCAACTATCT GAAATTCTTC GAGCGCGCTC GCACCGAGTG GCTGCGCGCA 
CTGGGGGTCG ACCAGCAGGC GCTGGCCGAT ACGACCGGAG CCATCTTCGT GGTGCGCAGC 
ACCGCCGTGG ACTATCGCGC GCCCGCCCGC CTGGATGACC TGCTGCAGGT CCGTTCACGT 
ATGGAACGGG TGGGGCCGGC ATCGGTCCAA TTTGCCCAGG AAAGCTGGCG CGGCGACATT 
CTGCTCGTCT CAGGCACGAT TCGTGTTGGA TGTGTCGACC GGCTCACATT CCGGCCGACC 
CCGATTCCCG CTCCCATACT CGCAACCATC AAAGCCGCCG CATGA 

 

Protein sequence

MSSFDWNLRV YWEDTDAGGV VFYANYLKFF ERARTEWLRA LGVDQQALAD TTGAIFVVRS 
TAVDYRAPAR LDDLLQVRSR MERVGPASVQ FAQESWRGDI LLVSGTIRVG CVDRLTFRPT 
PIPAPILATI KAAA