| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0547 |
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| Symbol | |
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| ID | 1219352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 591452 |
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| End bp | 593155 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637236906 |
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| Product | putative sugar transporter transmembrane protein |
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| Protein accession | NP_518668 |
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| Protein GI | 17545266 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.212245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.692505 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACCG TGCAAAGTGC ACCGAACGCG CCCGTCGGGC GCATGCAGCC CTCGCCCATG
ACCCGGGAGG AGAAGAAGGT CATCTTCGCC TCCTCGCTGG GCACGGTGTT CGAGTGGTAC
GACTTCTATC TCTATGGGTC CCTGGCGGCC ATCATCGCCA AGCAGTTCTT TTCCGGGCTG
GACCCGACGG CGGCGTTCAT CTTTGCGCTG CTGGCATTCG CGGCGGGCTT CCTGGTGCGG
CCGTTCGGCG CGCTGGTGTT CGGCCGGCTG GGCGACATGA TCGGGCGCAA GTACACCTTC
CTGATCACCA TCCTGATCAT GGGCACGTCG ACCTTCATCG TCGGCCTGCT GCCCTCCTAC
ACCACGATCG GGGCGGCCGC ACCGGTCATC CTCATCATGC TGCGCCTGCT GCAGGGCCTG
GCGCTGGGCG GCGAGTACGG CGGTGCCGCC ACCTACGTCG CCGAGCACGC GCCGCACGGG
CGGCGGGGCA ATTACACGTC GTGGATCCAG ACCACCGCCA CGCTGGGCCT GTTCCTGTCG
CTGATCGTGA TCCTGGTGGT GCGCGAGCTG ACCGGCGCAT CGTTCGAGGA CTGGGGCTGG
CGCATCCCGT TCCTGGTGTC GATCGTGCTG CTGGCCACGT CGGTGTACAT CCGCCTGTCG
ATGAGCGAGT CGCCGGCGTT CCAGAAGATG AAGGCCGAGG GCAAGACCTC CAAGGCCCCG
CTGACGGAAT CGTTCGGCCA GTGGCGCAAC CTGAAGATCG TGATCCTGGC GCTGGTGGGC
CTGACCGCCG GCCAGGCCGT GGTCTGGTAC ACGGGCCAGT TCTATGCGCT GTTCTTCCTG
ACGCAGGTGC TGAAGGTGGA TGCGTTCACG GCCAACGTGC TGATTGCCGT GGCGCTGGCC
ATCGGCACGC CGTTCTTCGT GTTCTTCGGC TCGCTGTCGG ACCGCATCGG CCGCAAGGGG
ATCATCATGG CCGGTTGCCT GCTGGCGGTG CTGACCTACT TCCCGCTGTT CAAGGCGCTC
ACCCACTATG CCAATCCGGC GCTGGAGCGT GCCCAGCAGA CCGCGCAGAT CACCATCAAG
GCCGATCCGA AGGAATGCTC GTTCCAGGGC AGCCCGATCG CGCGGGAAGT CGATTTCCGC
TCGTCGTGCG ACATCGCCAA GCGCACGCTC GCGCAATCGT CGGCCAGCTA TGAATCGGAA
GACGCGCCGG CCGGCACCAT CGCCTCGGTG ACGATCGCCG GCAGGGAAAT CGCCTCGCTC
AACGCCAGCC GCACGGCCGA CGGCCAGAAC TTCGATGCCG ACAGCAAGAA GAAGATCACC
GACTTCAAGA AATCGGTGAG CGACGCGCTC AAGGCGGCGA ACTACCCGAG CAAGGCCGAC
CCGGCGCAGA TGAACACGGT GATGGTGCTG GTGATCCTGG TGATCCTGGT GATCTACGTG
ACCATGGTCT ATGGCCCGAT CGCGGCAATG CTGGTGGAGC TGTTCCCGAC GCGCATCCGC
TATACGTCGA TGTCGCTGCC GTACCACATC GGCAACGGCT GGTTCGGCGG CCTGCTGCCG
ACCATCTCGT TCGCGCTGGT GGCGCAGCAC GGCAACATCT ACTACGGGCT GTGGTACCCG
ATCTGGATTG CCGCCATCAC CTTCGTGATC GGGGCCCTGT TCGTGCGGGA GACCAAGGAC
GTCGACATCT ATCGCCACGA CTGA
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| Protein sequence | MATVQSAPNA PVGRMQPSPM TREEKKVIFA SSLGTVFEWY DFYLYGSLAA IIAKQFFSGL
DPTAAFIFAL LAFAAGFLVR PFGALVFGRL GDMIGRKYTF LITILIMGTS TFIVGLLPSY
TTIGAAAPVI LIMLRLLQGL ALGGEYGGAA TYVAEHAPHG RRGNYTSWIQ TTATLGLFLS
LIVILVVREL TGASFEDWGW RIPFLVSIVL LATSVYIRLS MSESPAFQKM KAEGKTSKAP
LTESFGQWRN LKIVILALVG LTAGQAVVWY TGQFYALFFL TQVLKVDAFT ANVLIAVALA
IGTPFFVFFG SLSDRIGRKG IIMAGCLLAV LTYFPLFKAL THYANPALER AQQTAQITIK
ADPKECSFQG SPIAREVDFR SSCDIAKRTL AQSSASYESE DAPAGTIASV TIAGREIASL
NASRTADGQN FDADSKKKIT DFKKSVSDAL KAANYPSKAD PAQMNTVMVL VILVILVIYV
TMVYGPIAAM LVELFPTRIR YTSMSLPYHI GNGWFGGLLP TISFALVAQH GNIYYGLWYP
IWIAAITFVI GALFVRETKD VDIYRHD
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