Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0521 |
Symbol | |
ID | 1219325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 559056 |
End bp | 559922 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637236879 |
Product | hypothetical protein |
Protein accession | NP_518642 |
Protein GI | 17545240 |
COG category | [R] General function prediction only |
COG ID | [COG1451] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0129218 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGGGC GGCGACCACC GGCATCGCCC ACCGCTGCCG CATCCGCGCA GCTGGAGCTG CCGCTGCTGG CGCCACCGGC CGCTCCGGAT GCCGCCCCGC CGTCCGCCGA CCCCGCACAG CCCGACCCGG CCGCACCGCT GGGCCCCGAC CAGCGCCGCC TCGCGCTCGG CGAGCGCACG CTGGTCTACC ACCTGAAACG CTCGTCGCGG CGCACCATCG GCTTTGTCGT CGATGACCGC GGCCTGTCCA TCACGGCGCC GCGCTGGGTG ACGCTCGCCG AGATCGAGCA CGCCATCGCC GAAAAGCAGA AGTGGATCTT CGCCAAGCTG GCCGAATGGC ACACCAGCGC CGCGCGCCGC GTGCTGCCGC CCATGCGGTG GGAAGACGGC GCGACGCTGC CCTTCCTCGG CAAGCCCGTC ATGCTCAAGC TGGAGTCGCC CATCGGCGCG CTGGTGTTCG ACGCCGACAT GCGCACCCTG CACCTCGGCC TGCCGCCCAC CGCCACCGGG CAGCAGATCA AGGACCGCGT GCAGGGCTGG CTGCAGACCC AGGCGCGACG GCTGTTCGGC GAGCGGCTGG ACGTGTATGC CGAACGCCTC GGCGTGCGGC ACAGCGCCTA TGCCCTGTCC TCGGCCGCGA CGCGCTGGGG CAGCTGCACG GCCGACGGCA AGATCCGGCT CAACTGGCGG CTGGTGCATT TCCCGCTGTC GCTGATCGAC TACGTGGTGG CGCACGAGTT GGCGCATCTC AAGGAGATGA ACCACAGCCC ACGCTTCTGG GACACGGTGG AGTCGATCTT TCCCGAGTTC CGCGAGGCGC GGGAGCAATT GCGGTCGCAT CCGCCAGAGT ATTTGCCTGT CTTCTGA
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Protein sequence | MKGRRPPASP TAAASAQLEL PLLAPPAAPD AAPPSADPAQ PDPAAPLGPD QRRLALGERT LVYHLKRSSR RTIGFVVDDR GLSITAPRWV TLAEIEHAIA EKQKWIFAKL AEWHTSAARR VLPPMRWEDG ATLPFLGKPV MLKLESPIGA LVFDADMRTL HLGLPPTATG QQIKDRVQGW LQTQARRLFG ERLDVYAERL GVRHSAYALS SAATRWGSCT ADGKIRLNWR LVHFPLSLID YVVAHELAHL KEMNHSPRFW DTVESIFPEF REAREQLRSH PPEYLPVF
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