Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0515 |
Symbol | |
ID | 1219319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 551121 |
End bp | 553556 |
Gene Length | 2436 bp |
Protein Length | 811 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637236873 |
Product | organic solvent tolerance transmembrane protein |
Protein accession | NP_518636 |
Protein GI | 17545234 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1452] Organic solvent tolerance protein OstA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.877133 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.048519 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAC CGAACCGAGC CAGGAAAACC CGGCAGCGCA CCGCTTTTGC TGCGCCCGAT CAGCGGACCG CACCCCGTCG TGGCGCGCTG GCGCTGCGGC CGCTGGTGTT CGCGGTGGCC GGGGTCTGGA CGGCGGCATC CGCGGCGCAG AGTCAGGGCG CCACGCAGCA GGCGGCGTCC GCGCAGGCAC CCTCGTCGGC CGCTTCCGTG ACGGCCCTGG CGGTGTCGGG CCCGACCACG CCGGGCGGCG CACCGCTGGT GCCCAAGATG GCCGAGCCCG TCAAGCGCCC GGACAACGCC GTGCCCTCGT TTGCCGCCGC CGATGCCATG GACGGCCGCA CCAATGAGGA CATCCACCTG CGCGGCCACG GCGAGCTGCG CCGCAACGGC ACCGTGGTCA AGGGCGACAC GCTGGACTAC AACCAGGACA CCGATTTCGC CACCGCCACC GGCAACGTGC GCCTGTTCCG CGACGGCACG CTCGTCACCG GCCCGGACGC CGCGCTCAAG GTGACCGCCA ACGAGGGCAC CATGCACACG CCCTCGTACG AATTCCACAC CGTGGGCGGC CGCGGCAGCG CCGAGCGCAT CGATTTCATC GACAAGGACA ACAGCCGCAT CACCAAGGGC ACGTACACCA CGTGTTCGCC GGACAACGTC GACTGGTACT TCAGCGCCAG CCAGATCGAC ATCGACAGCG ACCGCCAGGT CGGCTCCGGC CGCGCTGGTG TGCTGCACTT CCTGGGCATG CCGGTGTTCG CCTCGCCGGT GTTCGATTTC CCGCTCAACG ATGAGCGCCG CAGCGGCTTT CTCGCGCCGG TGTTCGGCTA CAGCAGCCGC AGCGGCGCCG ACGTGACGCT GCCGTACTAC TTCAACATCG CGCCCAACCG GGACCTGACG CTGTATCCGC GTCTGCTCTC GCAGCGCGGC CTGCAGTTGG GCGCCGAGTA TCGCTACCTG AGCCAGACCT ACAACGGCGT GCTGCGCGGC GAATTCCTGC CCAATGATCG CGAGGCCGAC CGCAACCGCT GGTCGATCGC GCTGGTGCAC AACCAGCGTC TGGCGACCGG CCTGAACGCC TACGTCAACT ACAACAAGGT CTCCGACAGC ACCTACCCGG ACGACCTCGG CCGCAGCATC GTCACGGCGA CGCAGCGCCA GTACACGCAG GAAGGCGGCG TCACGTATTC CATCGGCGAC TGGGTGGCCC TGGCGCGGGT GCAGAAGTTC CAGACGCTGT CGACCGCGAC CACGGCGCTG TCGCCGCCGT ACGAGCGCGT GCCGCAGCTG AACCTGTCGT ACAACCGGTA CGATGTCGGC GGCTTCGACA TCAACTTCCA GACCGACTAC ACCAAGTTCA GCATCCCGAC CGAGAACACG GTCCAGGGCG AGCGCCTGTT CATGCAGCCG ACGATCAGCT ATCCGATCAT CCGGCCGGGC TGGTTCGTCA CGCCCAAGTT CATCCTGAAC ACGACGTCGT ACCGCCTGGA CCGCCCGACG GGCGACACGC AGGCTTCGCA GATCAACCGC ACGCTGCCGA CCGTCTCGCT CGATTCGGGG CTGACCTTCG AGCGCGATAC GCCGCTGGTG TCGAAGTGGT TCGGCCGCAG CTACATCCAG ACGCTGGAGC CGCGGCTGTT CTACGTCTAC ACGCCGTTCC GCGACCAGTC GCAGATCCCG CTGTTCGATA CGGCGCAGTC GGACTACAAC CTCGGCCAGA TCTTCACCGA GAACCCGTAC ACCGGCTACG ACCGCATCGC CGACAACAAC AAGCTGACGG CCGGCGTGAC CACCCGCTTC ATCGAGTCCG AGACGGGCAT CGAGCGCCTG CGCGCCACGC TGGCCCAGCG CCTGGACTTC GAGGGCCAGC GCGTGACCCT GGCCGGCTCG GCGCCCACCT CGGTGCGCCG CTATTCGGAC CTGTTGGGCG CGACCACCAT CCAGATGTTC CGCGGTATCT TTTTCGATAC CAACCTTCAG TACAATCAGG ACATCGACCG CATCATGCGC TCGACGATGG CGTTCAGCTG GAAGCCGGAT GCCAACAAGG TGATCAACCT CGGCTACCGT TACTACCGCG CCGATGCCAA CACCGGGCAG CTGGCGCTGG AGCAGACCGA CATCTCGGCG CAGTGGCCGC TGACGCGCCG CCTATATGGC CTGGGGCGCA TCGGCTACGA CATGGATGCC AAGAAGCCGT CGGACATGCT GCTGGGCTTC GAATATGTCG CCGACTGCTG GGTCGGGCGG CTGGCGGTGC AGCGCTACAG CAACGCGACC TCGGGCTATA CGACGCACAT CTTTGCCCAG ATCGAGTTCA AGGGGCTGTC GAAGGTGGGG AACAATCCGA TCGACGTGAT CCGACTCAAC GTGCCCGGCT ACCAGCCGGT CACCGCGCAG CCGGTCACGC CGTCCGTGCT GGATCAATAC GAATGA
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Protein sequence | MTEPNRARKT RQRTAFAAPD QRTAPRRGAL ALRPLVFAVA GVWTAASAAQ SQGATQQAAS AQAPSSAASV TALAVSGPTT PGGAPLVPKM AEPVKRPDNA VPSFAAADAM DGRTNEDIHL RGHGELRRNG TVVKGDTLDY NQDTDFATAT GNVRLFRDGT LVTGPDAALK VTANEGTMHT PSYEFHTVGG RGSAERIDFI DKDNSRITKG TYTTCSPDNV DWYFSASQID IDSDRQVGSG RAGVLHFLGM PVFASPVFDF PLNDERRSGF LAPVFGYSSR SGADVTLPYY FNIAPNRDLT LYPRLLSQRG LQLGAEYRYL SQTYNGVLRG EFLPNDREAD RNRWSIALVH NQRLATGLNA YVNYNKVSDS TYPDDLGRSI VTATQRQYTQ EGGVTYSIGD WVALARVQKF QTLSTATTAL SPPYERVPQL NLSYNRYDVG GFDINFQTDY TKFSIPTENT VQGERLFMQP TISYPIIRPG WFVTPKFILN TTSYRLDRPT GDTQASQINR TLPTVSLDSG LTFERDTPLV SKWFGRSYIQ TLEPRLFYVY TPFRDQSQIP LFDTAQSDYN LGQIFTENPY TGYDRIADNN KLTAGVTTRF IESETGIERL RATLAQRLDF EGQRVTLAGS APTSVRRYSD LLGATTIQMF RGIFFDTNLQ YNQDIDRIMR STMAFSWKPD ANKVINLGYR YYRADANTGQ LALEQTDISA QWPLTRRLYG LGRIGYDMDA KKPSDMLLGF EYVADCWVGR LAVQRYSNAT SGYTTHIFAQ IEFKGLSKVG NNPIDVIRLN VPGYQPVTAQ PVTPSVLDQY E
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