Gene RSc0501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0501 
SymbolruvA 
ID1219305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp535388 
End bp535969 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content68% 
IMG OID637236859 
ProductHolliday junction DNA helicase RuvA 
Protein accessionNP_518622 
Protein GI17545220 
COG category[L] Replication, recombination and repair 
COG ID[COG0632] Holliday junction resolvasome, DNA-binding subunit 
TIGRFAM ID[TIGR00084] Holliday junction DNA helicase, RuvA subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.180711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGAC GCATCGCCGG GACGCTGATC GAAAAGAACC CGCCGCACCT GCTGGTCGAC 
TGCCACGGCG TCGGCTATGA AATCGACGTG CCGATGAGCA CGTTCTACAA CCTGCCCGCC
ACCGGCGAGA AGGTCGCGCT GCTCACCCAG CAGATCGTGC GCGAGGATGC GCACCTGCTG
TACGGCTTCG GCACCGCCGC CGAGCGCGAG ACCTTCCGTC AGCTCATCAA GATCTCCGGC
ATCGGCGCGC GCATCGCGCT GGCGGTGCTG TCGGGCATGT CGGTGGCCGA ACTGGCGCAG
GCCGTGACGC TGCAGGAAGC CGGACGGCTG ACGCGCATTC CCGGCATCGG CAAAAAGACC
GCCGAGCGCC TGCTGCTCGA ACTCAAGGGC AAGCTCGGCG CCGACCTGGG CACGGTGCCG
GGCGGTCCGG CCGTGTCGGA CGATGCGGTC GATGTGCTCA ACGCCCTGCT GGCGCTGGGC
TACTCCGACA AGGAAGCCGC GCAGGCCATC AAGCAGGTGC CGGCCGGCAC CGGCGTCTCC
GAAGGCATCA AGCTGGCGCT CAAGGCCCTC TCCAAGGGCT GA
 
Protein sequence
MIGRIAGTLI EKNPPHLLVD CHGVGYEIDV PMSTFYNLPA TGEKVALLTQ QIVREDAHLL 
YGFGTAAERE TFRQLIKISG IGARIALAVL SGMSVAELAQ AVTLQEAGRL TRIPGIGKKT
AERLLLELKG KLGADLGTVP GGPAVSDDAV DVLNALLALG YSDKEAAQAI KQVPAGTGVS
EGIKLALKAL SKG