Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0501 |
Symbol | ruvA |
ID | 1219305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 535388 |
End bp | 535969 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637236859 |
Product | Holliday junction DNA helicase RuvA |
Protein accession | NP_518622 |
Protein GI | 17545220 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0632] Holliday junction resolvasome, DNA-binding subunit |
TIGRFAM ID | [TIGR00084] Holliday junction DNA helicase, RuvA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.180711 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGGAC GCATCGCCGG GACGCTGATC GAAAAGAACC CGCCGCACCT GCTGGTCGAC TGCCACGGCG TCGGCTATGA AATCGACGTG CCGATGAGCA CGTTCTACAA CCTGCCCGCC ACCGGCGAGA AGGTCGCGCT GCTCACCCAG CAGATCGTGC GCGAGGATGC GCACCTGCTG TACGGCTTCG GCACCGCCGC CGAGCGCGAG ACCTTCCGTC AGCTCATCAA GATCTCCGGC ATCGGCGCGC GCATCGCGCT GGCGGTGCTG TCGGGCATGT CGGTGGCCGA ACTGGCGCAG GCCGTGACGC TGCAGGAAGC CGGACGGCTG ACGCGCATTC CCGGCATCGG CAAAAAGACC GCCGAGCGCC TGCTGCTCGA ACTCAAGGGC AAGCTCGGCG CCGACCTGGG CACGGTGCCG GGCGGTCCGG CCGTGTCGGA CGATGCGGTC GATGTGCTCA ACGCCCTGCT GGCGCTGGGC TACTCCGACA AGGAAGCCGC GCAGGCCATC AAGCAGGTGC CGGCCGGCAC CGGCGTCTCC GAAGGCATCA AGCTGGCGCT CAAGGCCCTC TCCAAGGGCT GA
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Protein sequence | MIGRIAGTLI EKNPPHLLVD CHGVGYEIDV PMSTFYNLPA TGEKVALLTQ QIVREDAHLL YGFGTAAERE TFRQLIKISG IGARIALAVL SGMSVAELAQ AVTLQEAGRL TRIPGIGKKT AERLLLELKG KLGADLGTVP GGPAVSDDAV DVLNALLALG YSDKEAAQAI KQVPAGTGVS EGIKLALKAL SKG
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