Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0469 |
Symbol | |
ID | 1219273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 500625 |
End bp | 501371 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637236827 |
Product | hypothetical protein |
Protein accession | NP_518590 |
Protein GI | 17545188 |
COG category | [R] General function prediction only |
COG ID | [COG3568] Metal-dependent hydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.744864 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGCGCC TGCGTGTCGC CACCTACAAC ATCCACAAGG GCGTGACCGG CATCGCGCGG CGCGTGCGGG TGCACGATGT GCGGCAAGGG CTGCACACCA TGGACGCCGA CATCGTTTTC CTGCAGGAAG TGCAGGACCG CAACGACCGC CTGGTGGCCG CTGAACTGTT CGACCCGCAC TACACCCAGC TGCGATACCT GGCCACCGAC GTGTACCCGC ACACGGTGTA CGGCCGCAAT GCGGTGTACG ACCACGGGCA CCACGGCAAC GCCATCCTGT CGCGCTATCC GATCCTGCTG TCGGAGAACC TCGACATTTC CGACCATCGC TTCGAGCAGC GCGGGCTGCT GCATGCCGTC GCCGACCTGG GGTTTGGCGA GGTCCACCTG CTGTGCGCGC ATTTCGGCCT GTTCGCACGC AGCCGCCGGC GGCAGGCCGA GGCGCTGATC GAGCGCGTGT GCTCGGTGGT GCCCATCGAT GCGCCGCTGG TGGTGGCGGG CGACTTCAAC GACTGGAACA ACCGGCTCGA TCGCGTCATC TGCCAGGCGC TGGGCGTCAC CGAGGTGGCC GACAAGGCTG CCGGCGCGCG GCCGCTGCGC ACCTTTCCGA GCCACCTGCC GTGGCTGCGG CTGGACCGCA TCTATGTGCG CGGCTTCGAG ATCGACCGCG CGCATGCGCT GACCGGCCGC GACTGGGCCC AGCGGTCCGA TCACGTGCCC CTGCTGGCGG AACTGTCGCG CTCATGA
|
Protein sequence | MLRLRVATYN IHKGVTGIAR RVRVHDVRQG LHTMDADIVF LQEVQDRNDR LVAAELFDPH YTQLRYLATD VYPHTVYGRN AVYDHGHHGN AILSRYPILL SENLDISDHR FEQRGLLHAV ADLGFGEVHL LCAHFGLFAR SRRRQAEALI ERVCSVVPID APLVVAGDFN DWNNRLDRVI CQALGVTEVA DKAAGARPLR TFPSHLPWLR LDRIYVRGFE IDRAHALTGR DWAQRSDHVP LLAELSRS
|
| |