Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0419 |
Symbol | |
ID | 1219223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 445737 |
End bp | 446222 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637236777 |
Product | hypothetical protein |
Protein accession | NP_518540 |
Protein GI | 17545138 |
COG category | [S] Function unknown |
COG ID | [COG1839] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.292052 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.670063 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTCA CGGTAGTCCC CATCGTCAAG CCGGAAGCCA CCAACTTCAT CCTCGGCCAG TCGCACTTCA TCAAGACCGT GGAAGACCTC CACGAAGCGC TGGTCGGCGC GGTGCCCGGC ATCCGTTTCG GCCTGGCCTT CTGCGAGGCT TCCGGCAAGC GGCTGGTGCG CTGGTCCGGC AATGACGACG CCGCGCTCAA GCTGGCCCGC GACAACGCGC TCGCCATCGG CGCGGGTCAT GTGTTCCTGA TCTTCCTGGG CGACGGCTTT TTCCCCGTCA ACGTGCTGGC CGCCGTGCGC GCGGTGCCGG AGGTGTGCCG CATCTACTGC GCCACCGCCA ACCCGACGCA GGTGATCGTC GCGCAGACCG AGCAGGGCCG CGGCGTACTG GGCGTGGTGG ACGGCGCCTC GCCGCTGGGC ATCGAGACCG ATGCCGACAT CGCGTGGCGC AAGGACCTGC TGCGGCAGAT CGGCTACAAG CTGTAG
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Protein sequence | MELTVVPIVK PEATNFILGQ SHFIKTVEDL HEALVGAVPG IRFGLAFCEA SGKRLVRWSG NDDAALKLAR DNALAIGAGH VFLIFLGDGF FPVNVLAAVR AVPEVCRIYC ATANPTQVIV AQTEQGRGVL GVVDGASPLG IETDADIAWR KDLLRQIGYK L
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