Gene RSc0419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0419 
Symbol 
ID1219223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp445737 
End bp446222 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content68% 
IMG OID637236777 
Producthypothetical protein 
Protein accessionNP_518540 
Protein GI17545138 
COG category[S] Function unknown 
COG ID[COG1839] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.292052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.670063 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCA CGGTAGTCCC CATCGTCAAG CCGGAAGCCA CCAACTTCAT CCTCGGCCAG 
TCGCACTTCA TCAAGACCGT GGAAGACCTC CACGAAGCGC TGGTCGGCGC GGTGCCCGGC
ATCCGTTTCG GCCTGGCCTT CTGCGAGGCT TCCGGCAAGC GGCTGGTGCG CTGGTCCGGC
AATGACGACG CCGCGCTCAA GCTGGCCCGC GACAACGCGC TCGCCATCGG CGCGGGTCAT
GTGTTCCTGA TCTTCCTGGG CGACGGCTTT TTCCCCGTCA ACGTGCTGGC CGCCGTGCGC
GCGGTGCCGG AGGTGTGCCG CATCTACTGC GCCACCGCCA ACCCGACGCA GGTGATCGTC
GCGCAGACCG AGCAGGGCCG CGGCGTACTG GGCGTGGTGG ACGGCGCCTC GCCGCTGGGC
ATCGAGACCG ATGCCGACAT CGCGTGGCGC AAGGACCTGC TGCGGCAGAT CGGCTACAAG
CTGTAG
 
Protein sequence
MELTVVPIVK PEATNFILGQ SHFIKTVEDL HEALVGAVPG IRFGLAFCEA SGKRLVRWSG 
NDDAALKLAR DNALAIGAGH VFLIFLGDGF FPVNVLAAVR AVPEVCRIYC ATANPTQVIV
AQTEQGRGVL GVVDGASPLG IETDADIAWR KDLLRQIGYK L