Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0417 |
Symbol | apt |
ID | 1219221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 444221 |
End bp | 444916 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637236775 |
Product | adenine phosphoribosyltransferase |
Protein accession | NP_518538 |
Protein GI | 17545136 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0503] Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins |
TIGRFAM ID | [TIGR01090] adenine phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.572449 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.29511 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGCTG CCGTGCACCG TGCCTGCCGC ATTGTGGTGC GGCGCCATCC GGGCCGGGTG GTAGCCGGCT ACCGCATCGC CTTTTCTCTT TCTGTTTCAG CAATGACCGA CGCCAGCATC TCTCCGTCCT CGCCCGTTCC TGCCTCGACC GAACTGGGCG ATGTGACGCG CTACCTGCGC GAGCGCATCC GCACCGTGCC CGACTGGCCG CAGCTGGGGG TGATGTTCCG CGACATCACG CCGCTGCTGC AGGACCCGAA GAGCCTGCGC GTGCTGGTGG ACGTGTTCGT CCATCGCTAT ATGGGACAGG GGCTGAACCT GGTGGCGGGC ATCGATGCGC GCGGCTTCAT CCTCGGCTCC ATCGTCGCGT ACGAGCTGAA CCTGGGCTTC GTGCCGATCC GCAAGAAGGG CAAGCTGCCG TTCACCACCG TGGCCGAGGA GTACATGCTG GAGTACGGCA GCGCCACGGT GGAGATCCAC GCCGACGCCT GCAAGCCCGG CGACCGCGTG CTGCTGATCG ACGACCTGAT CGCCACCGGC GGCACCATGA TGGCCGGCAA GCGCCTGCTG GAGCGGCTGG GCGCGACGGT GGTGGAGGGC GCGGCCATCG TCGACCTGCC CGAACTGGGT GGCTCGCGCC TGCTGATGGA CGGCGGCCTG CCGCTCTTTA CCGTGTGCCG CTTCGACGGG CATTGA
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Protein sequence | MAAAVHRACR IVVRRHPGRV VAGYRIAFSL SVSAMTDASI SPSSPVPAST ELGDVTRYLR ERIRTVPDWP QLGVMFRDIT PLLQDPKSLR VLVDVFVHRY MGQGLNLVAG IDARGFILGS IVAYELNLGF VPIRKKGKLP FTTVAEEYML EYGSATVEIH ADACKPGDRV LLIDDLIATG GTMMAGKRLL ERLGATVVEG AAIVDLPELG GSRLLMDGGL PLFTVCRFDG H
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