| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0388 |
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| Symbol | |
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| ID | 1219191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 416629 |
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| End bp | 417972 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637236745 |
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| Product | putative Zinc protease-like signal peptide protein |
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| Protein accession | NP_518509 |
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| Protein GI | 17545107 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.886206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCCA TGTCCCTGAC CCTGAAGACG TTCCTGGCCG GCATGCTGGC CGCCGCGGCG
CACGGTGCGC TGGCCGCGCT GCCGATCGAG CACTGGACGG CCGCCACCGG CGCACGCGTG
TTCTTCGTGC CGAGCCCGTC GATCCCGATG CTCGATATCA ACCTCGATGT CGATGCCGGC
ACACGCTATG AGCCGGCGGC CAAGGTCGGT CTCGCCTCGC TCACGGCGGG CATGCTCGAC
AAGGGCGTCG CAGCCGTCGG CAGCACGCCG GCGCGCGACG AGGCGGCCAT CGCCGATGCC
TTTGCCGACG TGGGCGCCAG CTTCTCGGGC GGCGCCGGCG GCGACCGCAC CAGCCTGCGC
CTGCGCACGC TGTCCGATCC GGCCGAGCGC AAGCCCGCGG TGGACCTGAT GGCGCAGATC
GTCGCCGCGC CCACCGTGCC CGACGCCGTG CTGACGCGCG ACAAGCAGCG CACGGTCGCC
GCCATCCGCG AGTCGCTGAC CAAGCCCCAG GTGCTGGCCG ACCGCGCCTT CGGCACGGCC
ATCTACGGCA CGCACCCGTA CGGCCAGTCG GCGACGCCCG ACACGGTGCA GAGCATCACC
CGCGACGACA TCCTGCGCTT CTACCACGCC AACTACACCG CCAAGCGCGC CGTGGTCACG
CTGATTGGTG CGATCAGCCG GCAGGAGGCC GAGGCCATCG CCGAGCAGGT CACGCGCGGC
CTGCCGCCGG ATGGCGCCAC GCCGCCTGCG CTGCCCGCCG TCGATGCGCC GCTGGCCAAG
GCCGACACCG TGCGCATTGC GCACCCGGCG CAGCAGGCGA CCATCGTGAT GGGGCAGCCC
GGCATCGCGC GCAGCGACAA GGACTACTTC CCGCTGCTGG TCGGCAATTA CGTGCTGGGC
GGCGGCGGCT TCAGCTCGCG CCTGACCAAC GAAGTCCGCG AGAAGCGCGG CCTGACCTAC
AGCATCGGCA GCTATTTCGC GCCGGCCGCG CAGCTTGGCC CGTTCGAACT GGCGCTGCAG
ACGCGCAAGG ACCAGACCGA GCAGGCGCTG ACCGTGGTGC GCGACACCGT CGTCCGCTTT
GTCGCCGAGG GCCCGACCGA TGCCGAGCTC AAGGCCGCCA AGGACAACCT CGTCAACGGT
TTCCCGCTGC GCCTGGACAG CAACCGCAAG CTGCTGGACA ACGTCGCCAA CATCGCGTGG
TACAACCTGC CGCTCGACTA CCTGGACACC TGGACGCAGC GCGTCGCGGC CGTCACGCGC
GAGCAGGTGC GCGTCGCGTT CCAGCGCGTG CTGCAGCCGC AGACCATGGC GACCATCGTG
GTGGGCGGTC CGGCACCGCA CTGA
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| Protein sequence | MRAMSLTLKT FLAGMLAAAA HGALAALPIE HWTAATGARV FFVPSPSIPM LDINLDVDAG
TRYEPAAKVG LASLTAGMLD KGVAAVGSTP ARDEAAIADA FADVGASFSG GAGGDRTSLR
LRTLSDPAER KPAVDLMAQI VAAPTVPDAV LTRDKQRTVA AIRESLTKPQ VLADRAFGTA
IYGTHPYGQS ATPDTVQSIT RDDILRFYHA NYTAKRAVVT LIGAISRQEA EAIAEQVTRG
LPPDGATPPA LPAVDAPLAK ADTVRIAHPA QQATIVMGQP GIARSDKDYF PLLVGNYVLG
GGGFSSRLTN EVREKRGLTY SIGSYFAPAA QLGPFELALQ TRKDQTEQAL TVVRDTVVRF
VAEGPTDAEL KAAKDNLVNG FPLRLDSNRK LLDNVANIAW YNLPLDYLDT WTQRVAAVTR
EQVRVAFQRV LQPQTMATIV VGGPAPH
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