| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0379 |
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| Symbol | nasD |
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| ID | 1219182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 407924 |
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| End bp | 408730 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637236736 |
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| Product | putative nitrate ATP-binding ABC transporter protein |
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| Protein accession | NP_518500 |
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| Protein GI | 17545098 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
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| TIGRFAM ID | [TIGR01184] nitrate transport ATP-binding subunits C and D |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.95656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACA AATTCCTGCG CATCGAAAGC GTTGGCCAGG TCTTCAAGAC CCGGAAAGGC
CCGTTCGTCG CGCTGCGCGA CATCGACCTG AGCGTGGCGC GCGGCGAGTG CATCGCCCTG
ATCGGCCACT CGGGCTGCGG CAAGTCCACG CTGCTGAACC TGATCGCCGG GCTGACCCGG
CCGACCTCGG GCGGGCTGAT CCTGGCCGAG CGCGAGATCG CGGGGCCGGG GCCGGACCGC
GCGGTGGTGT TCCAGAACCA CTCGCTGCTG CCGTGGCTGA CCTGCTTCGA CAACGTGTAC
CTGGCCGTCG AGCGCGTGTT CGGCAAGACC GAATCGAAGG CGGACCTGAA AGCGCGCACG
CACGCGGCGC TGGCGCTGGT CGGCCTGTCG CACGCCGAGC ACAGGCATCC GCACGAGATC
TCCGGCGGCA TGAAGCAGCG CGTCGGCATC GCCCGCGCGC TGTCGATGGA ACCGAAGGTG
CTGCTGATGG ACGAGCCGTT CGGCGCGCTC GACGCGCTCA CCCGCGCGCA CCTGCAGGAC
GCGCTGCTGA AGATCATCGC CGCGACCGGC AGCACGGTGG TGATGGTCAC GCACGATGTG
GACGAAGCCG TGCTGCTGGC CGACCGCATC GTCATGATGA CCAACGGCCC GGCCGCGACC
ATCGGCGAGG TACTGACCGT CGGCCTGCCG CGCCCGCGCG TGCGGCTGGC GCTGGCCGAC
GATCCGGCCT ACCACGCCTG CCGCACCGCC GTGCTCGATT TCCTCTACCG CAAGCAGCGC
CACCCCGCGA TGGAGGAAGC GGCGTAG
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| Protein sequence | MSDKFLRIES VGQVFKTRKG PFVALRDIDL SVARGECIAL IGHSGCGKST LLNLIAGLTR
PTSGGLILAE REIAGPGPDR AVVFQNHSLL PWLTCFDNVY LAVERVFGKT ESKADLKART
HAALALVGLS HAEHRHPHEI SGGMKQRVGI ARALSMEPKV LLMDEPFGAL DALTRAHLQD
ALLKIIAATG STVVMVTHDV DEAVLLADRI VMMTNGPAAT IGEVLTVGLP RPRVRLALAD
DPAYHACRTA VLDFLYRKQR HPAMEEAA
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