Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0343 |
Symbol | amtB |
ID | 1219146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 374899 |
End bp | 376209 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637236700 |
Product | ammonium transporter |
Protein accession | NP_518464 |
Protein GI | 17545062 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0004] Ammonia permease |
TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCAACA AGGGCGACAC GGCGTGGCTG CTGGTTTCGA CCGCCTTCGT GATCCTGATG ACGCTGCCGG GCCTGGCGCT GTTCTACGGC GGCCTGGTGC GCAAGAAGAA CATGCTGTCG GTCCTGATGC AATGTACCGG CATCTTCTCG CTCATCATGA TCCTGTGGGC CATCTACGGC TACAGCATCG CCTTCACCGA GGGCAATGCC TTCTTCGGCG GGCTCGACCG GCTGTTCCTG AAGGGTCTGA CGCCGGATTC GGTTGCCGCT ACGTTCAGCA AGGGCGTGGT AGTGCCGGAG TATGCGTACT TCGCCTTCCA GGGCGCATTT GCCGCGATCA CCTGCGCGCT GATCATCGGT GCCTTCGCCG AGCGCGCCAA GTTCTCGGCC GTGCTGGTCT TCGTGGTGCT GTGGTTCACC TTTGCCTACC TGCCGATCGC CCACATGGTC TGGTTCTGGC CGGGGCCGGA CGGCTTCACC GACGCCAAGG CGGCCGAAGT GATGACGGCC AAGGGCGGCT GGCTGTTCCA GAAGGGCGCG CTGGACTTCG CCGGCGGCAC CGTGGTGCAC ATCAACGCCG CCGTGGCGGG CCTGGTGGGT GCCTTCCTGT TCGGCAAGCG GATCGGCTTC GGCCGCGAAG CGCTCAAGCC GCATAGCCTG ACGCTGACCA TGGTCGGTGC CTCGCTGCTG TGGTTCGGCT GGTTCGGCTT CAACGCCGGT TCGGCCCTGG AAGCCAACGG CAGCGCCGCG CTGGCCTTCG TCAACACGCT GCTCGCCACC GCCGCCGCCG TGTTGTCGTG GAGCTTCGGC GAGTGGATCG GCAAGAGCAA GCCGTCAATG CTGGGTGCCG CGTCGGGCGC CGTCGCCGGC CTGGTGGCGA TCACCCCGGC AGCCGGCTTC GTCGGCCCGA TGGGCGCCAT CGCGATGGGC ATCCTCGCCG GCGTGCTGTG CCTGTGGGGC GTCAACGGCC TCAAGCGCAT GCTGGGCATG GACGACACGC TGGACGTGTT CGGCGTGCAC GGCGTGGGCG GCATCATGGG CGCGCTGCTG ACCGGCGTGT TCGCCTCGCC GAGCCTGGGC GGCACCGGCA TCTACGACTA TGTCGCCAAC AAGGTGGCCG ATGGCTACTC GATCGGCGGT CAGCTGTGGA TTCAGCTGCA GGGCGTGCTG ACCACCATCG TGTGGTCTGC CGTGGTGGCT TTCGTTGCCT ACAAGATCGT GGACGCGATC ATCGGTCTGC GCGTGCCGGA AGAAGAGGAG CGCGAAGGTC TGGACATCAC GTCTCACGGC GAAACCGCTT ACGAAGACTG A
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Protein sequence | MPNKGDTAWL LVSTAFVILM TLPGLALFYG GLVRKKNMLS VLMQCTGIFS LIMILWAIYG YSIAFTEGNA FFGGLDRLFL KGLTPDSVAA TFSKGVVVPE YAYFAFQGAF AAITCALIIG AFAERAKFSA VLVFVVLWFT FAYLPIAHMV WFWPGPDGFT DAKAAEVMTA KGGWLFQKGA LDFAGGTVVH INAAVAGLVG AFLFGKRIGF GREALKPHSL TLTMVGASLL WFGWFGFNAG SALEANGSAA LAFVNTLLAT AAAVLSWSFG EWIGKSKPSM LGAASGAVAG LVAITPAAGF VGPMGAIAMG ILAGVLCLWG VNGLKRMLGM DDTLDVFGVH GVGGIMGALL TGVFASPSLG GTGIYDYVAN KVADGYSIGG QLWIQLQGVL TTIVWSAVVA FVAYKIVDAI IGLRVPEEEE REGLDITSHG ETAYED
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