Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0327 |
Symbol | dac |
ID | 1219130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 358458 |
End bp | 359651 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637236684 |
Product | penicillin-binding transmembrane protein |
Protein accession | NP_518448 |
Protein GI | 17545046 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACCC GTATCCCCTC CCGAGCCCTT CCCTCCGCCG CCGTGACGCT CGTCGCGGCA GCCGTGCTTG CCGCGGCAGC GCCGGCACTG GCGCAGCCCG TCCCGGCGCC GCAGGTCGCA GCCCGCGCAT GGATGCTGAC CGATGTGACG AGCGGCCAGG TGCTGGGCGG CGGCAACGTA GACGAGCGCA TCGAGCCCGC CTCGCTGACC AAGCTGATGA CCGCGTACCT CGCCGTCGAG GCCGTGCGCG ACGGCAAGCT CAAGTACGAC CAGATGCTCA CCCCGACCGA GACCGTGCGC AGCGTCAAGA CCGACGAGTC GCGCATGTTC CTGCAGCCCG GCAAGCCCGT CTCGGTACGC GACCTGCTGC AGGGCCTGAT CGTGCAGTCG GGCAATGACG CGGCGCTGGT GCTGGCCGAG GCCGTGGGCG GCACCGAGAC CAACTTCGTG ATGCTGATGA ACCGCGAGGC CGAACGCCTG GGCATGAAGG GCACGCACTT CATGAACGCC GCCGGCCTGC CCGACCCGAA CCACTACACC ACGGCGCGCG ACCTGTCGAT CCTGACCGCG GCGCTGATCC GCGATTTCCC CGAGGACTAC AAGTTCTATT CGCAGAAGGA ATTCACCTAT AACAACATCA AGCAGCCCAA CCGCAACCGG CTGCTGTGGA TCGACCCGAC GGTCGACGGC GTCAAGACCG GCCACACCAA GTCGGCGGGC TATTGCCTGA TCACCTCGGC CAAGCGCCCG CTGCCCGACG TGCCGAACGC GAGCCGCCGC CTGCTGTCGG TGATGATCGG CACCAAGAGC GAACAGGTCC GCACGCAGGA GAGCCTGAAG GTGCTCAACT ACGGCTACCA GTTCTTCGAC ACCCTGCGCC TGTACGAAGC CAAGCAGGCG CTGCAGACGC CCGACGTCTA CAAGGGCCAG GCCAAGACCG TCAAGCTCGG CGTGGCGGAA GACAAGTGGA TCACGGTGCC CAAGGGCTCG GGCGGCCGCC TCAAGCCGGT GCTCGAGCGC AAGGAGCCGC TGATCGCCCC GATCGCGCAG GGCCAGCAGC TGGGCACGGT CAAGGTGATG GACGGCGCGA CCGTGGTGCA GGAGTTCCCG GTGGTGGCGC TGGAAGCCGT GCCCGAAGCC GGATTCATCG GCCGCACCAT CGATTCGATC AAGCTGTGGT TCAAGAAGAA GTAA
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Protein sequence | MQTRIPSRAL PSAAVTLVAA AVLAAAAPAL AQPVPAPQVA ARAWMLTDVT SGQVLGGGNV DERIEPASLT KLMTAYLAVE AVRDGKLKYD QMLTPTETVR SVKTDESRMF LQPGKPVSVR DLLQGLIVQS GNDAALVLAE AVGGTETNFV MLMNREAERL GMKGTHFMNA AGLPDPNHYT TARDLSILTA ALIRDFPEDY KFYSQKEFTY NNIKQPNRNR LLWIDPTVDG VKTGHTKSAG YCLITSAKRP LPDVPNASRR LLSVMIGTKS EQVRTQESLK VLNYGYQFFD TLRLYEAKQA LQTPDVYKGQ AKTVKLGVAE DKWITVPKGS GGRLKPVLER KEPLIAPIAQ GQQLGTVKVM DGATVVQEFP VVALEAVPEA GFIGRTIDSI KLWFKKK
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