Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0313 |
Symbol | |
ID | 1219116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 344284 |
End bp | 345408 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637236670 |
Product | hypothetical protein |
Protein accession | NP_518434 |
Protein GI | 17545032 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATCACCT GCCGTCCCCC TCAGCTCGAG GTCCGCGTCG TCGACGGACG GTCGGTCGCC TACCTGTCGG GCGACTGGAC CACGCTCGCG CTGGCCGAAC GGGCGGGCGT GCGCAGCGCG CGCCGGCAGA TCCGCGCGGG GTTGAACACC GCCAATGCCT GGTGCCTGAC GGAAGTGGGA CGCATCGACC ATTTCGGCGC GCAACTGCTG TGGCGCGCGT GGGGCAACCG CTGGCCCGAG CTGCTGGACG CGCGCCCCGA CCAGCGCCGC ATGATCGACC GCGTCGCCCG GCTGGACCCG GGCGGCTGGA AGAAGCGCAT CGCGCCGCGC ATCAACCCGG TGACGGTGCT GGGCAATGCC ATGCTGGACT TCGCCCGCCA CCTGCGGATC GGCGTGGCGA TGGTCGGCCA GCTGATGTTC GACCTGCTGC GCTTCGTGCG CGCGCCGCAC CGCGGGCCGT GGCGCGAGAT CTCCGCCAAC ATCTACAGCA CCGGCTACAA GGCGCTCGGC ATCACCGCGC TGGTGGGCTT CCTGATCGGC ATCGTGCTGA GCTACCTGTC GGCTAACCAG CTGCGCGTGT TCGGCGCCAG CATCTTCATC GTCAACATCC TGGGCATGGC CATCATCCGC GAGCTGGGGC CGGTGCTGGC GGCCATCCTG GTGGCGGGGC GCTCGGGCTC GGCCATCACC GCGCAGATCG GCGTGATGCG CGTGACCGAA GAGCTCGACG CGATGCGCGT GATGGGCATC TCGCACGGCT TCCGGCTGAT CCTGCCCAAG GTGATCGCGC TGGCGATCGC CATGCCGCTG CTGGTGGCGT GGACGGATCT GCTGGCGCTG GGCGGCGGCA TCCTGGCGGC GAGGTTCCAG CTCGACATCA GCCCGACGTA TTTCATCACC TCGCTGCCCG ATGCGGTGCC GGTGGCCAAC CTGTGGCTCG GCATCGGCAA GGGCGTGGTG TTCGGCATGC TGATCGCGCT GACGGCGTGC CACTTCGGCC TGCGCATCCA GCCGAACACG CAGAGCCTGG GCGAGGGCAC GACCACCTCG GTGGTGGTGT CGATCACCAT CGTGATCCTG GCCGATGCCG TGTTCGCCAT CCTCTTCAAG GACGTCGGGA TATGA
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Protein sequence | MITCRPPQLE VRVVDGRSVA YLSGDWTTLA LAERAGVRSA RRQIRAGLNT ANAWCLTEVG RIDHFGAQLL WRAWGNRWPE LLDARPDQRR MIDRVARLDP GGWKKRIAPR INPVTVLGNA MLDFARHLRI GVAMVGQLMF DLLRFVRAPH RGPWREISAN IYSTGYKALG ITALVGFLIG IVLSYLSANQ LRVFGASIFI VNILGMAIIR ELGPVLAAIL VAGRSGSAIT AQIGVMRVTE ELDAMRVMGI SHGFRLILPK VIALAIAMPL LVAWTDLLAL GGGILAARFQ LDISPTYFIT SLPDAVPVAN LWLGIGKGVV FGMLIALTAC HFGLRIQPNT QSLGEGTTTS VVVSITIVIL ADAVFAILFK DVGI
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